Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC245100.7-201ENST00000609678 442 ntBASIC4.78□□□□□ -1.64
SSX4O60224 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SSX4O60224 RMST_10.1-201ENST00000616309 154 ntBASIC4.78□□□□□ -1.64
SSX4O60224 AC022306.3-201ENST00000619930 550 ntBASIC4.78□□□□□ -1.64
SSX4O60224 AC007342.8-201ENST00000623278 678 ntBASIC4.78□□□□□ -1.64
SSX4O60224 AC024023.1-201ENST00000624530 922 ntBASIC4.78□□□□□ -1.64
SSX4O60224 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.78□□□□□ -1.64
SSX4O60224 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.78□□□□□ -1.64
SSX4O60224 AC136428.4-201ENST00000634254 1155 ntBASIC4.78□□□□□ -1.64
SSX4O60224 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SSX4O60224 AL590396.2-201ENST00000636511 1041 ntBASIC4.78□□□□□ -1.64
SSX4O60224 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.78□□□□□ -1.64
SSX4O60224 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.78□□□□□ -1.64
SSX4O60224 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSX4O60224 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSX4O60224 AC073429.2-201ENST00000569694 1444 ntBASIC4.78□□□□□ -1.64
SSX4O60224 AC083843.3-201ENST00000623679 2186 ntBASIC4.78□□□□□ -1.64
SSX4O60224 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSX4O60224 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SSX4O60224 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
SSX4O60224 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSX4O60224 BTBD10P1-201ENST00000549824 1352 ntBASIC4.78□□□□□ -1.64
SSX4O60224 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.78□□□□□ -1.64
SSX4O60224 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
SSX4O60224 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
SSX4O60224 ZNF652P1-201ENST00000442420 1309 ntBASIC4.77□□□□□ -1.65
SSX4O60224 MTND4P9-201ENST00000507819 1346 ntBASIC4.77□□□□□ -1.65
SSX4O60224 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.77□□□□□ -1.65
SSX4O60224 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SSX4O60224 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
SSX4O60224 RNA5SP234-201ENST00000363916 119 ntBASIC4.77□□□□□ -1.65
SSX4O60224 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SSX4O60224 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
SSX4O60224 RNU1-77P-201ENST00000390868 162 ntBASIC4.77□□□□□ -1.65
SSX4O60224 STAT4-203ENST00000409995 709 ntTSL 5 BASIC4.77□□□□□ -1.65
SSX4O60224 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SSX4O60224 OR5M12P-201ENST00000423388 929 ntBASIC4.77□□□□□ -1.65
SSX4O60224 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
SSX4O60224 RPL7P56-201ENST00000429441 717 ntBASIC4.77□□□□□ -1.65
SSX4O60224 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.77□□□□□ -1.65
SSX4O60224 CYCSP12-201ENST00000437729 300 ntBASIC4.77□□□□□ -1.65
SSX4O60224 NANOGP9-201ENST00000439890 892 ntBASIC4.77□□□□□ -1.65
SSX4O60224 YWHAZP2-201ENST00000440317 728 ntBASIC4.77□□□□□ -1.65
SSX4O60224 AC019185.1-201ENST00000442718 389 ntBASIC4.77□□□□□ -1.65
SSX4O60224 AC097499.1-201ENST00000444277 208 ntBASIC4.77□□□□□ -1.65
SSX4O60224 AL450023.1-201ENST00000450868 751 ntBASIC4.77□□□□□ -1.65
SSX4O60224 AURKAPS1-201ENST00000451805 1212 ntBASIC4.77□□□□□ -1.65
SSX4O60224 CBX1P5-201ENST00000475330 559 ntBASIC4.77□□□□□ -1.65
SSX4O60224 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC4.77□□□□□ -1.65
SSX4O60224 AC004815.1-201ENST00000484185 331 ntBASIC4.77□□□□□ -1.65
SSX4O60224 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.77□□□□□ -1.65
SSX4O60224 AC147055.3-201ENST00000510547 851 ntBASIC4.77□□□□□ -1.65
SSX4O60224 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.77□□□□□ -1.65
SSX4O60224 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.77□□□□□ -1.65
SSX4O60224 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.77□□□□□ -1.65
SSX4O60224 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC4.77□□□□□ -1.65
SSX4O60224 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.77□□□□□ -1.65
SSX4O60224 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SSX4O60224 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.77□□□□□ -1.65
SSX4O60224 AL049779.2-201ENST00000553847 315 ntBASIC4.77□□□□□ -1.65
SSX4O60224 SETP1-201ENST00000556014 845 ntBASIC4.77□□□□□ -1.65
SSX4O60224 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.77□□□□□ -1.65
SSX4O60224 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.77□□□□□ -1.65
SSX4O60224 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.77□□□□□ -1.65
SSX4O60224 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.77□□□□□ -1.65
SSX4O60224 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.77□□□□□ -1.65
SSX4O60224 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
SSX4O60224 AC124856.1-201ENST00000600819 896 ntBASIC4.77□□□□□ -1.65
SSX4O60224 AC079610.2-201ENST00000604818 690 ntBASIC4.77□□□□□ -1.65
SSX4O60224 AC021851.1-201ENST00000608537 1082 ntBASIC4.77□□□□□ -1.65
SSX4O60224 AC005156.1-201ENST00000613371 573 ntBASIC4.77□□□□□ -1.65
SSX4O60224 AL121890.2-201ENST00000617644 465 ntBASIC4.77□□□□□ -1.65
SSX4O60224 AC022106.2-201ENST00000620114 757 ntBASIC4.77□□□□□ -1.65
SSX4O60224 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.77□□□□□ -1.65
SSX4O60224 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.77□□□□□ -1.65
SSX4O60224 CASC19-222ENST00000641321 1173 ntBASIC4.77□□□□□ -1.65
SSX4O60224 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SSX4O60224 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.77□□□□□ -1.65
SSX4O60224 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SSX4O60224 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.77□□□□□ -1.65
SSX4O60224 LINC01355-201ENST00000566551 5444 ntBASIC4.77□□□□□ -1.65
SSX4O60224 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SSX4O60224 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SSX4O60224 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
SSX4O60224 MFSD8-213ENST00000641134 1327 ntBASIC4.76□□□□□ -1.65
SSX4O60224 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SSX4O60224 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC4.76□□□□□ -1.65
SSX4O60224 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.76□□□□□ -1.65
SSX4O60224 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
SSX4O60224 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
SSX4O60224 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.76□□□□□ -1.65
SSX4O60224 SNORD56.6-201ENST00000384569 71 ntBASIC4.76□□□□□ -1.65
SSX4O60224 MIR620-201ENST00000385232 95 ntBASIC4.76□□□□□ -1.65
SSX4O60224 AL078599.1-201ENST00000402075 293 ntBASIC4.76□□□□□ -1.65
SSX4O60224 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.76□□□□□ -1.65
SSX4O60224 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.76□□□□□ -1.65
SSX4O60224 AL139148.1-201ENST00000427122 680 ntBASIC4.76□□□□□ -1.65
SSX4O60224 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.76□□□□□ -1.65
SSX4O60224 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.76□□□□□ -1.65
SSX4O60224 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms