Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 MT-RNR1-201ENST00000389680 954 ntBASIC4.73□□□□□ -1.65
PDLIM1O00151 RNA5SP105-201ENST00000391123 113 ntBASIC4.73□□□□□ -1.65
PDLIM1O00151 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
PDLIM1O00151 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDLIM1O00151 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.73□□□□□ -1.65
PDLIM1O00151 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PDLIM1O00151 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.73□□□□□ -1.65
PDLIM1O00151 SLC35E1P1-201ENST00000419313 864 ntBASIC4.73□□□□□ -1.65
PDLIM1O00151 AC093414.1-201ENST00000434712 514 ntBASIC4.73□□□□□ -1.65
PDLIM1O00151 MRPL48P1-201ENST00000445390 636 ntBASIC4.73□□□□□ -1.65
PDLIM1O00151 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.73□□□□□ -1.65
PDLIM1O00151 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.73□□□□□ -1.65
PDLIM1O00151 RAB28P3-201ENST00000448325 597 ntBASIC4.73□□□□□ -1.65
PDLIM1O00151 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.73□□□□□ -1.65
PDLIM1O00151 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.73□□□□□ -1.65
PDLIM1O00151 RN7SL41P-201ENST00000476144 297 ntBASIC4.73□□□□□ -1.65
PDLIM1O00151 RPS21P4-201ENST00000487122 248 ntBASIC4.73□□□□□ -1.65
PDLIM1O00151 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.73□□□□□ -1.65
PDLIM1O00151 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.73□□□□□ -1.65
PDLIM1O00151 RNA5SP373-201ENST00000517271 95 ntBASIC4.73□□□□□ -1.65
PDLIM1O00151 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.73□□□□□ -1.65
PDLIM1O00151 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.73□□□□□ -1.65
PDLIM1O00151 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.73□□□□□ -1.65
PDLIM1O00151 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.73□□□□□ -1.65
PDLIM1O00151 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.73□□□□□ -1.65
PDLIM1O00151 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.73□□□□□ -1.65
PDLIM1O00151 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.73□□□□□ -1.65
PDLIM1O00151 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
PDLIM1O00151 AL049779.2-201ENST00000553847 315 ntBASIC4.73□□□□□ -1.65
PDLIM1O00151 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.73□□□□□ -1.65
PDLIM1O00151 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.73□□□□□ -1.65
PDLIM1O00151 NDUFB4P11-201ENST00000560510 395 ntBASIC4.73□□□□□ -1.65
PDLIM1O00151 AC116553.2-201ENST00000564203 463 ntBASIC4.73□□□□□ -1.65
PDLIM1O00151 OR1F2P-201ENST00000570470 933 ntBASIC4.73□□□□□ -1.65
PDLIM1O00151 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.73□□□□□ -1.65
PDLIM1O00151 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PDLIM1O00151 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.73□□□□□ -1.65
PDLIM1O00151 AC004241.3-201ENST00000611728 517 ntBASIC4.73□□□□□ -1.65
PDLIM1O00151 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.73□□□□□ -1.65
PDLIM1O00151 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.73□□□□□ -1.65
PDLIM1O00151 MIR4727-201ENST00000622232 55 ntBASIC4.73□□□□□ -1.65
PDLIM1O00151 AC004808.2-201ENST00000627965 773 ntBASIC4.73□□□□□ -1.65
PDLIM1O00151 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.73□□□□□ -1.65
PDLIM1O00151 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PDLIM1O00151 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
PDLIM1O00151 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDLIM1O00151 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
PDLIM1O00151 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PDLIM1O00151 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PDLIM1O00151 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.72□□□□□ -1.65
PDLIM1O00151 PANDAR-201ENST00000629595 1506 ntBASIC4.72□□□□□ -1.65
PDLIM1O00151 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
PDLIM1O00151 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PDLIM1O00151 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PDLIM1O00151 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDLIM1O00151 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDLIM1O00151 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.72□□□□□ -1.65
PDLIM1O00151 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.72□□□□□ -1.65
PDLIM1O00151 U3.2-201ENST00000362981 210 ntBASIC4.72□□□□□ -1.65
PDLIM1O00151 RNU6-670P-201ENST00000364312 104 ntBASIC4.72□□□□□ -1.65
PDLIM1O00151 RNA5SP90-201ENST00000364801 99 ntBASIC4.72□□□□□ -1.65
PDLIM1O00151 AC083799.1-201ENST00000366451 910 ntBASIC4.72□□□□□ -1.65
PDLIM1O00151 MIR7-1-201ENST00000384871 110 ntBASIC4.72□□□□□ -1.65
PDLIM1O00151 MIR3074-201ENST00000384885 81 ntBASIC4.72□□□□□ -1.65
PDLIM1O00151 OR8V1P-201ENST00000395193 873 ntBASIC4.72□□□□□ -1.65
PDLIM1O00151 GSTM3P2-201ENST00000412746 530 ntBASIC4.72□□□□□ -1.65
PDLIM1O00151 RPL35AP24-201ENST00000413846 330 ntBASIC4.72□□□□□ -1.65
PDLIM1O00151 GTF3AP1-201ENST00000416942 1004 ntBASIC4.72□□□□□ -1.65
PDLIM1O00151 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.72□□□□□ -1.65
PDLIM1O00151 RPS27P18-201ENST00000431701 247 ntBASIC4.72□□□□□ -1.65
PDLIM1O00151 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.72□□□□□ -1.65
PDLIM1O00151 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.72□□□□□ -1.65
PDLIM1O00151 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.72□□□□□ -1.65
PDLIM1O00151 OR2AO1P-201ENST00000476497 403 ntBASIC4.72□□□□□ -1.65
PDLIM1O00151 RN7SL177P-201ENST00000476596 299 ntBASIC4.72□□□□□ -1.65
PDLIM1O00151 RPL7P39-201ENST00000481157 744 ntBASIC4.72□□□□□ -1.65
PDLIM1O00151 RPL7P40-201ENST00000481703 745 ntBASIC4.72□□□□□ -1.65
PDLIM1O00151 AK4P6-201ENST00000505168 528 ntBASIC4.72□□□□□ -1.65
PDLIM1O00151 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC4.72□□□□□ -1.65
PDLIM1O00151 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.72□□□□□ -1.65
PDLIM1O00151 RNU6-941P-201ENST00000516346 108 ntBASIC4.72□□□□□ -1.65
PDLIM1O00151 SCARNA21.2-201ENST00000516600 166 ntBASIC4.72□□□□□ -1.65
PDLIM1O00151 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.72□□□□□ -1.65
PDLIM1O00151 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.72□□□□□ -1.65
PDLIM1O00151 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.72□□□□□ -1.65
PDLIM1O00151 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.72□□□□□ -1.65
PDLIM1O00151 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.72□□□□□ -1.65
PDLIM1O00151 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.72□□□□□ -1.65
PDLIM1O00151 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.72□□□□□ -1.65
PDLIM1O00151 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.72□□□□□ -1.65
PDLIM1O00151 RPL10P14-201ENST00000565265 298 ntBASIC4.72□□□□□ -1.65
PDLIM1O00151 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.72□□□□□ -1.65
PDLIM1O00151 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.72□□□□□ -1.65
PDLIM1O00151 AC245128.3-201ENST00000594721 748 ntBASIC4.72□□□□□ -1.65
PDLIM1O00151 AL512329.2-201ENST00000607350 548 ntBASIC4.72□□□□□ -1.65
PDLIM1O00151 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.72□□□□□ -1.65
PDLIM1O00151 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.72□□□□□ -1.65
PDLIM1O00151 AC015722.2-201ENST00000622210 551 ntBASIC4.72□□□□□ -1.65
PDLIM1O00151 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.72□□□□□ -1.65
PDLIM1O00151 AC074101.1-201ENST00000637861 241 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms