Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.69□□□□□ -1.66
NDE1Q9NXR1 AC235565.1-201ENST00000456962 1325 ntBASIC4.69□□□□□ -1.66
NDE1Q9NXR1 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.69□□□□□ -1.66
NDE1Q9NXR1 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.69□□□□□ -1.66
NDE1Q9NXR1 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NDE1Q9NXR1 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NDE1Q9NXR1 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.68□□□□□ -1.66
NDE1Q9NXR1 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.68□□□□□ -1.66
NDE1Q9NXR1 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
NDE1Q9NXR1 RNU6-697P-201ENST00000363348 107 ntBASIC4.68□□□□□ -1.66
NDE1Q9NXR1 SNORA27.3-201ENST00000364937 134 ntBASIC4.68□□□□□ -1.66
NDE1Q9NXR1 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NDE1Q9NXR1 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NDE1Q9NXR1 SNORA67-201ENST00000384423 137 ntBASIC4.68□□□□□ -1.66
NDE1Q9NXR1 AC007068.1-201ENST00000396690 844 ntBASIC4.68□□□□□ -1.66
NDE1Q9NXR1 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NDE1Q9NXR1 CDY8P-201ENST00000428380 1279 ntBASIC4.68□□□□□ -1.66
NDE1Q9NXR1 BX323845.1-201ENST00000432417 179 ntBASIC4.68□□□□□ -1.66
NDE1Q9NXR1 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.68□□□□□ -1.66
NDE1Q9NXR1 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.68□□□□□ -1.66
NDE1Q9NXR1 SCAND3P1-201ENST00000439854 1060 ntBASIC4.68□□□□□ -1.66
NDE1Q9NXR1 SNRPFP2-201ENST00000440710 251 ntBASIC4.68□□□□□ -1.66
NDE1Q9NXR1 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.68□□□□□ -1.66
NDE1Q9NXR1 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC4.68□□□□□ -1.66
NDE1Q9NXR1 CDY20P-201ENST00000447528 1279 ntBASIC4.68□□□□□ -1.66
NDE1Q9NXR1 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.68□□□□□ -1.66
NDE1Q9NXR1 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC4.68□□□□□ -1.66
NDE1Q9NXR1 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
NDE1Q9NXR1 SETP12-201ENST00000514068 805 ntBASIC4.68□□□□□ -1.66
NDE1Q9NXR1 SEC11B-201ENST00000518383 499 ntBASIC4.68□□□□□ -1.66
NDE1Q9NXR1 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.68□□□□□ -1.66
NDE1Q9NXR1 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.68□□□□□ -1.66
NDE1Q9NXR1 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.68□□□□□ -1.66
NDE1Q9NXR1 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.68□□□□□ -1.66
NDE1Q9NXR1 AC006518.1-201ENST00000541449 943 ntBASIC4.68□□□□□ -1.66
NDE1Q9NXR1 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.68□□□□□ -1.66
NDE1Q9NXR1 AL136520.1-202ENST00000555494 763 ntBASIC4.68□□□□□ -1.66
NDE1Q9NXR1 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.68□□□□□ -1.66
NDE1Q9NXR1 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.68□□□□□ -1.66
NDE1Q9NXR1 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.68□□□□□ -1.66
NDE1Q9NXR1 LINC00557-201ENST00000563184 1279 ntBASIC4.68□□□□□ -1.66
NDE1Q9NXR1 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC4.68□□□□□ -1.66
NDE1Q9NXR1 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC4.68□□□□□ -1.66
NDE1Q9NXR1 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.68□□□□□ -1.66
NDE1Q9NXR1 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC4.68□□□□□ -1.66
NDE1Q9NXR1 HMGB2P1-201ENST00000591146 634 ntBASIC4.68□□□□□ -1.66
NDE1Q9NXR1 AC067773.1-201ENST00000603284 1094 ntBASIC4.68□□□□□ -1.66
NDE1Q9NXR1 OR4H6P-202ENST00000603819 340 ntBASIC4.68□□□□□ -1.66
NDE1Q9NXR1 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.68□□□□□ -1.66
NDE1Q9NXR1 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.68□□□□□ -1.66
NDE1Q9NXR1 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NDE1Q9NXR1 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.68□□□□□ -1.66
NDE1Q9NXR1 AL669942.2-201ENST00000620352 697 ntBASIC4.68□□□□□ -1.66
NDE1Q9NXR1 AL359742.1-201ENST00000622497 540 ntBASIC4.68□□□□□ -1.66
NDE1Q9NXR1 AL356490.1-201ENST00000623079 479 ntBASIC4.68□□□□□ -1.66
NDE1Q9NXR1 CYP4F35P-202ENST00000636121 390 ntBASIC4.68□□□□□ -1.66
NDE1Q9NXR1 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NDE1Q9NXR1 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NDE1Q9NXR1 KPNA2P2-201ENST00000419546 1489 ntBASIC4.68□□□□□ -1.66
NDE1Q9NXR1 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
NDE1Q9NXR1 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NDE1Q9NXR1 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
NDE1Q9NXR1 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
NDE1Q9NXR1 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
NDE1Q9NXR1 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NDE1Q9NXR1 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NDE1Q9NXR1 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NDE1Q9NXR1 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
NDE1Q9NXR1 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NDE1Q9NXR1 RN7SKP275-201ENST00000364626 301 ntBASIC4.67□□□□□ -1.66
NDE1Q9NXR1 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NDE1Q9NXR1 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
NDE1Q9NXR1 SDHDP6-201ENST00000414693 480 ntBASIC4.67□□□□□ -1.66
NDE1Q9NXR1 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.67□□□□□ -1.66
NDE1Q9NXR1 AL451139.1-201ENST00000434718 346 ntBASIC4.67□□□□□ -1.66
NDE1Q9NXR1 AC069285.2-201ENST00000440210 275 ntBASIC4.67□□□□□ -1.66
NDE1Q9NXR1 TXNP2-201ENST00000443918 295 ntBASIC4.67□□□□□ -1.66
NDE1Q9NXR1 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.67□□□□□ -1.66
NDE1Q9NXR1 AC104849.1-201ENST00000462623 405 ntBASIC4.67□□□□□ -1.66
NDE1Q9NXR1 AC100832.1-201ENST00000471945 383 ntBASIC4.67□□□□□ -1.66
NDE1Q9NXR1 AC098583.1-201ENST00000480875 255 ntBASIC4.67□□□□□ -1.66
NDE1Q9NXR1 AC010350.1-201ENST00000504908 231 ntBASIC4.67□□□□□ -1.66
NDE1Q9NXR1 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.67□□□□□ -1.66
NDE1Q9NXR1 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NDE1Q9NXR1 AC112206.4-201ENST00000515142 405 ntBASIC4.67□□□□□ -1.66
NDE1Q9NXR1 AC117525.1-201ENST00000515228 503 ntBASIC4.67□□□□□ -1.66
NDE1Q9NXR1 RNA5SP392-201ENST00000516905 112 ntBASIC4.67□□□□□ -1.66
NDE1Q9NXR1 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.67□□□□□ -1.66
NDE1Q9NXR1 MYL12AP1-201ENST00000518490 515 ntBASIC4.67□□□□□ -1.66
NDE1Q9NXR1 AC134349.2-201ENST00000535136 910 ntBASIC4.67□□□□□ -1.66
NDE1Q9NXR1 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.67□□□□□ -1.66
NDE1Q9NXR1 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.67□□□□□ -1.66
NDE1Q9NXR1 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.67□□□□□ -1.66
NDE1Q9NXR1 TVP23CP2-201ENST00000571473 623 ntBASIC4.67□□□□□ -1.66
NDE1Q9NXR1 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.67□□□□□ -1.66
NDE1Q9NXR1 AC134669.1-201ENST00000581275 672 ntBASIC4.67□□□□□ -1.66
NDE1Q9NXR1 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC4.67□□□□□ -1.66
NDE1Q9NXR1 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.67□□□□□ -1.66
NDE1Q9NXR1 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.67□□□□□ -1.66
NDE1Q9NXR1 AC069307.1-201ENST00000602820 447 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 7.8 ms