Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RFT1Q96AA3 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RFT1Q96AA3 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RFT1Q96AA3 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.53□□□□□ -1.68
RFT1Q96AA3 OR13C1P-202ENST00000641378 2919 ntBASIC4.53□□□□□ -1.68
RFT1Q96AA3 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RFT1Q96AA3 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
RFT1Q96AA3 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
RFT1Q96AA3 MIR133B-201ENST00000362210 119 ntBASIC4.53□□□□□ -1.68
RFT1Q96AA3 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RFT1Q96AA3 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
RFT1Q96AA3 RNA5SP284-201ENST00000384547 118 ntBASIC4.53□□□□□ -1.68
RFT1Q96AA3 AC099535.1-201ENST00000408928 371 ntBASIC4.53□□□□□ -1.68
RFT1Q96AA3 RNU2-17P-201ENST00000410290 190 ntBASIC4.53□□□□□ -1.68
RFT1Q96AA3 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.53□□□□□ -1.68
RFT1Q96AA3 FGF12-202ENST00000430714 603 ntTSL 2 BASIC4.53□□□□□ -1.68
RFT1Q96AA3 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RFT1Q96AA3 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.53□□□□□ -1.68
RFT1Q96AA3 AL357520.1-201ENST00000441557 453 ntBASIC4.53□□□□□ -1.68
RFT1Q96AA3 AC064862.4-201ENST00000442180 334 ntBASIC4.53□□□□□ -1.68
RFT1Q96AA3 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.53□□□□□ -1.68
RFT1Q96AA3 AC073587.1-201ENST00000447093 876 ntBASIC4.53□□□□□ -1.68
RFT1Q96AA3 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.53□□□□□ -1.68
RFT1Q96AA3 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.53□□□□□ -1.68
RFT1Q96AA3 RANP1-206ENST00000455094 651 ntBASIC4.53□□□□□ -1.68
RFT1Q96AA3 AC073073.1-201ENST00000493920 463 ntBASIC4.53□□□□□ -1.68
RFT1Q96AA3 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC4.53□□□□□ -1.68
RFT1Q96AA3 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.53□□□□□ -1.68
RFT1Q96AA3 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.53□□□□□ -1.68
RFT1Q96AA3 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.53□□□□□ -1.68
RFT1Q96AA3 RNU6-1102P-201ENST00000516149 96 ntBASIC4.53□□□□□ -1.68
RFT1Q96AA3 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.53□□□□□ -1.68
RFT1Q96AA3 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.53□□□□□ -1.68
RFT1Q96AA3 AC025918.2-201ENST00000558683 763 ntBASIC4.53□□□□□ -1.68
RFT1Q96AA3 AGGF1P9-201ENST00000561884 913 ntBASIC4.53□□□□□ -1.68
RFT1Q96AA3 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.53□□□□□ -1.68
RFT1Q96AA3 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.53□□□□□ -1.68
RFT1Q96AA3 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.53□□□□□ -1.68
RFT1Q96AA3 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.53□□□□□ -1.68
RFT1Q96AA3 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.53□□□□□ -1.68
RFT1Q96AA3 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.53□□□□□ -1.68
RFT1Q96AA3 SNORD91B-202ENST00000608459 222 ntBASIC4.53□□□□□ -1.68
RFT1Q96AA3 AC000068.2-201ENST00000608816 460 ntBASIC4.53□□□□□ -1.68
RFT1Q96AA3 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.53□□□□□ -1.68
RFT1Q96AA3 AL445493.3-201ENST00000619568 477 ntBASIC4.53□□□□□ -1.68
RFT1Q96AA3 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.53□□□□□ -1.68
RFT1Q96AA3 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.53□□□□□ -1.68
RFT1Q96AA3 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
RFT1Q96AA3 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
RFT1Q96AA3 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RFT1Q96AA3 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.53□□□□□ -1.68
RFT1Q96AA3 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.69
RFT1Q96AA3 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.53□□□□□ -1.69
RFT1Q96AA3 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
RFT1Q96AA3 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RFT1Q96AA3 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
RFT1Q96AA3 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
RFT1Q96AA3 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.52□□□□□ -1.69
RFT1Q96AA3 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
RFT1Q96AA3 RNA5SP319-201ENST00000362768 119 ntBASIC4.52□□□□□ -1.69
RFT1Q96AA3 RNA5SP234-201ENST00000363916 119 ntBASIC4.52□□□□□ -1.69
RFT1Q96AA3 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RFT1Q96AA3 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.52□□□□□ -1.69
RFT1Q96AA3 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RFT1Q96AA3 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.52□□□□□ -1.69
RFT1Q96AA3 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
RFT1Q96AA3 AL035079.1-201ENST00000405210 287 ntBASIC4.52□□□□□ -1.69
RFT1Q96AA3 RNU2-50P-201ENST00000410494 143 ntBASIC4.52□□□□□ -1.69
RFT1Q96AA3 EIF4A1P3-201ENST00000411521 244 ntBASIC4.52□□□□□ -1.69
RFT1Q96AA3 BMS1P17-202ENST00000416720 316 ntBASIC4.52□□□□□ -1.69
RFT1Q96AA3 NAP1L4P2-201ENST00000425958 899 ntBASIC4.52□□□□□ -1.69
RFT1Q96AA3 FHP1-201ENST00000442741 703 ntBASIC4.52□□□□□ -1.69
RFT1Q96AA3 AC073109.1-201ENST00000445066 978 ntBASIC4.52□□□□□ -1.69
RFT1Q96AA3 RPL34P26-201ENST00000445636 354 ntBASIC4.52□□□□□ -1.69
RFT1Q96AA3 YWHAEP1-201ENST00000453697 763 ntBASIC4.52□□□□□ -1.69
RFT1Q96AA3 AL356981.1-201ENST00000454879 684 ntBASIC4.52□□□□□ -1.69
RFT1Q96AA3 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.52□□□□□ -1.69
RFT1Q96AA3 AC007998.1-201ENST00000474156 672 ntBASIC4.52□□□□□ -1.69
RFT1Q96AA3 AC090686.1-201ENST00000481577 749 ntBASIC4.52□□□□□ -1.69
RFT1Q96AA3 AC010627.1-201ENST00000503819 1294 ntBASIC4.52□□□□□ -1.69
RFT1Q96AA3 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.52□□□□□ -1.69
RFT1Q96AA3 AC027338.1-201ENST00000514840 825 ntBASIC4.52□□□□□ -1.69
RFT1Q96AA3 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.52□□□□□ -1.69
RFT1Q96AA3 AP003049.1-201ENST00000529418 457 ntBASIC4.52□□□□□ -1.69
RFT1Q96AA3 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.52□□□□□ -1.69
RFT1Q96AA3 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC4.52□□□□□ -1.69
RFT1Q96AA3 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.52□□□□□ -1.69
RFT1Q96AA3 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.52□□□□□ -1.69
RFT1Q96AA3 AL136520.1-202ENST00000555494 763 ntBASIC4.52□□□□□ -1.69
RFT1Q96AA3 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
RFT1Q96AA3 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
RFT1Q96AA3 AC068714.1-201ENST00000559623 800 ntBASIC4.52□□□□□ -1.69
RFT1Q96AA3 HMGB3P26-201ENST00000560051 582 ntBASIC4.52□□□□□ -1.69
RFT1Q96AA3 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.52□□□□□ -1.69
RFT1Q96AA3 MTND4LP25-201ENST00000570218 163 ntBASIC4.52□□□□□ -1.69
RFT1Q96AA3 AC022884.3-201ENST00000579571 248 ntBASIC4.52□□□□□ -1.69
RFT1Q96AA3 RN7SL708P-201ENST00000580952 299 ntBASIC4.52□□□□□ -1.69
RFT1Q96AA3 ADAD1P2-201ENST00000588476 646 ntBASIC4.52□□□□□ -1.69
RFT1Q96AA3 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.52□□□□□ -1.69
RFT1Q96AA3 AC005252.1-201ENST00000604518 1063 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms