Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 MTATP6P20-201ENST00000414147 562 ntBASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 HSFY4P-201ENST00000415994 1181 ntBASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 BX664727.1-201ENST00000416024 466 ntBASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 NANOGP5-201ENST00000424456 877 ntBASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 RNF19BPX-201ENST00000426224 625 ntBASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 FO393414.1-201ENST00000428697 1184 ntBASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 MTND2P21-201ENST00000436242 1042 ntBASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 AC006994.1-201ENST00000438212 839 ntBASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 CYCSP24-201ENST00000445119 316 ntBASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 AC044797.1-201ENST00000445744 679 ntBASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 NPM1P29-201ENST00000483112 803 ntBASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 MTCO3P35-201ENST00000485582 781 ntBASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 PPM1AP1-201ENST00000502740 1135 ntBASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 AC106872.4-201ENST00000510050 523 ntBASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 GTF2F2P1-201ENST00000511083 675 ntBASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 MTND4LP31-201ENST00000514859 294 ntBASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 BX510359.5-201ENST00000515651 304 ntBASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 RNU6-943P-201ENST00000516960 98 ntBASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 AL049779.2-201ENST00000553847 315 ntBASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 AC069304.3-201ENST00000603938 1084 ntBASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 RNU6-1192P-201ENST00000612197 107 ntBASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 RNU6-489P-201ENST00000618289 107 ntBASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 AC093875.1-201ENST00000623688 504 ntBASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 AC073869.10-201ENST00000642016 354 ntBASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
ZNF549Q6P9A3 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 MTND4P8-201ENST00000514997 1362 ntBASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 CASC19-221ENST00000641309 1382 ntBASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 ICE2P1-201ENST00000512800 1849 ntBASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 RNU1-43P-201ENST00000365052 165 ntBASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 RNU6-354P-201ENST00000383862 107 ntBASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 RNU6-610P-201ENST00000384264 107 ntBASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 AL049545.1-201ENST00000401856 572 ntBASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 AL589994.1-201ENST00000404962 340 ntBASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 DUTP5-201ENST00000406790 469 ntBASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 KRR1P1-201ENST00000419430 803 ntBASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 AL139148.1-201ENST00000427122 680 ntBASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 BX323845.1-201ENST00000432417 179 ntBASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 Z73417.1-201ENST00000447373 778 ntBASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 RPL7P61-201ENST00000451721 751 ntBASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 TPTE2P5-203ENST00000458118 728 ntBASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 AC009127.1-201ENST00000467090 155 ntBASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 RPL21P18-201ENST00000469899 480 ntBASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 RPS21P4-201ENST00000487122 248 ntBASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 RPS26P24-201ENST00000497656 331 ntBASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 MTCO1P31-201ENST00000506355 492 ntBASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 FABP5P6-201ENST00000510588 409 ntBASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 RNU6-311P-201ENST00000516224 102 ntBASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 MTCO1P47-201ENST00000523889 1271 ntBASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 EMP1-206ENST00000537612 505 ntTSL 3 BASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms