Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 RN7SL197P-201ENST00000466981 299 ntBASIC5.41□□□□□ -1.54
PTCHD3Q3KNS1 RPL23AP44-201ENST00000482216 473 ntBASIC5.41□□□□□ -1.54
PTCHD3Q3KNS1 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.41□□□□□ -1.54
PTCHD3Q3KNS1 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.41□□□□□ -1.54
PTCHD3Q3KNS1 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.41□□□□□ -1.54
PTCHD3Q3KNS1 AC034244.1-201ENST00000507687 207 ntBASIC5.41□□□□□ -1.54
PTCHD3Q3KNS1 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.41□□□□□ -1.54
PTCHD3Q3KNS1 AC026782.2-201ENST00000510845 636 ntBASIC5.41□□□□□ -1.54
PTCHD3Q3KNS1 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.41□□□□□ -1.54
PTCHD3Q3KNS1 AC092593.2-201ENST00000513866 913 ntBASIC5.41□□□□□ -1.54
PTCHD3Q3KNS1 AC097486.1-201ENST00000515331 210 ntBASIC5.41□□□□□ -1.54
PTCHD3Q3KNS1 PRELID3BP4-201ENST00000515476 571 ntBASIC5.41□□□□□ -1.54
PTCHD3Q3KNS1 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.41□□□□□ -1.54
PTCHD3Q3KNS1 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.41□□□□□ -1.54
PTCHD3Q3KNS1 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC5.41□□□□□ -1.54
PTCHD3Q3KNS1 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC5.41□□□□□ -1.54
PTCHD3Q3KNS1 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.41□□□□□ -1.54
PTCHD3Q3KNS1 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.41□□□□□ -1.54
PTCHD3Q3KNS1 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.41□□□□□ -1.54
PTCHD3Q3KNS1 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5.41□□□□□ -1.54
PTCHD3Q3KNS1 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.41□□□□□ -1.54
PTCHD3Q3KNS1 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC5.41□□□□□ -1.54
PTCHD3Q3KNS1 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.41□□□□□ -1.54
PTCHD3Q3KNS1 AC009094.1-201ENST00000564443 426 ntBASIC5.41□□□□□ -1.54
PTCHD3Q3KNS1 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.41□□□□□ -1.54
PTCHD3Q3KNS1 H3F3BP2-201ENST00000583907 357 ntBASIC5.41□□□□□ -1.54
PTCHD3Q3KNS1 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.41□□□□□ -1.54
PTCHD3Q3KNS1 AL020997.3-201ENST00000602843 359 ntBASIC5.41□□□□□ -1.54
PTCHD3Q3KNS1 AC021171.1-201ENST00000603137 706 ntBASIC5.41□□□□□ -1.54
PTCHD3Q3KNS1 AC016877.3-201ENST00000606778 504 ntBASIC5.41□□□□□ -1.54
PTCHD3Q3KNS1 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC5.41□□□□□ -1.54
PTCHD3Q3KNS1 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.41□□□□□ -1.54
PTCHD3Q3KNS1 AC025574.2-201ENST00000615621 514 ntBASIC5.41□□□□□ -1.54
PTCHD3Q3KNS1 AC108359.1-201ENST00000616451 1211 ntBASIC5.41□□□□□ -1.54
PTCHD3Q3KNS1 STMN1P1-201ENST00000617809 440 ntBASIC5.41□□□□□ -1.54
PTCHD3Q3KNS1 AC026422.1-201ENST00000623961 452 ntBASIC5.41□□□□□ -1.54
PTCHD3Q3KNS1 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.41□□□□□ -1.54
PTCHD3Q3KNS1 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTCHD3Q3KNS1 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.41□□□□□ -1.54
PTCHD3Q3KNS1 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTCHD3Q3KNS1 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.41□□□□□ -1.54
PTCHD3Q3KNS1 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.41□□□□□ -1.54
PTCHD3Q3KNS1 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
PTCHD3Q3KNS1 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTCHD3Q3KNS1 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTCHD3Q3KNS1 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PTCHD3Q3KNS1 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 RNU6-1242P-201ENST00000391052 103 ntBASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 U3.28-201ENST00000391249 210 ntBASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 RPSAP35-201ENST00000413753 818 ntBASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 AC007161.1-204ENST00000423039 460 ntBASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 RPL7P56-201ENST00000429441 717 ntBASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 AC112492.1-201ENST00000449607 712 ntBASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 MRPL35P4-201ENST00000453682 566 ntBASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 AZGP1P2-201ENST00000454506 345 ntBASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 RN7SL583P-201ENST00000475692 287 ntBASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 SIAH1P1-201ENST00000479411 923 ntBASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 MTND2P14-201ENST00000482139 351 ntBASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 RN7SL184P-201ENST00000488308 297 ntBASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 OSBPL9P5-201ENST00000542581 171 ntBASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 AC090695.1-201ENST00000561269 1222 ntBASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 AC008088.1-201ENST00000580993 280 ntBASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 AC125494.3-201ENST00000602759 455 ntBASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 AC002069.2-201ENST00000603580 883 ntBASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms