Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 RNU6-347P-201ENST00000516658 105 ntBASIC6.2□□□□□ -1.42
RHBDL3P58872 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC6.2□□□□□ -1.42
RHBDL3P58872 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC6.2□□□□□ -1.42
RHBDL3P58872 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC6.2□□□□□ -1.42
RHBDL3P58872 AL136295.6-201ENST00000610486 658 ntBASIC6.2□□□□□ -1.42
RHBDL3P58872 AC068880.4-201ENST00000623082 495 ntBASIC6.2□□□□□ -1.42
RHBDL3P58872 SEC63P2-201ENST00000503863 1939 ntBASIC6.2□□□□□ -1.42
RHBDL3P58872 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
RHBDL3P58872 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
RHBDL3P58872 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
RHBDL3P58872 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
RHBDL3P58872 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC6.19□□□□□ -1.42
RHBDL3P58872 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
RHBDL3P58872 RNF6P1-201ENST00000444889 1784 ntBASIC6.19□□□□□ -1.42
RHBDL3P58872 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
RHBDL3P58872 VN2R3P-201ENST00000422626 1412 ntBASIC6.19□□□□□ -1.42
RHBDL3P58872 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6.19□□□□□ -1.42
RHBDL3P58872 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RHBDL3P58872 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RHBDL3P58872 RNA5SP443-201ENST00000363083 132 ntBASIC6.19□□□□□ -1.42
RHBDL3P58872 RNA5SP455-201ENST00000365190 119 ntBASIC6.19□□□□□ -1.42
RHBDL3P58872 GCNT6-201ENST00000379591 934 ntBASIC6.19□□□□□ -1.42
RHBDL3P58872 RN7SKP114-201ENST00000410327 279 ntBASIC6.19□□□□□ -1.42
RHBDL3P58872 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.19□□□□□ -1.42
RHBDL3P58872 AL133482.1-201ENST00000415988 498 ntBASIC6.19□□□□□ -1.42
RHBDL3P58872 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC6.19□□□□□ -1.42
RHBDL3P58872 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC6.19□□□□□ -1.42
RHBDL3P58872 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.19□□□□□ -1.42
RHBDL3P58872 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RHBDL3P58872 RPS26P47-201ENST00000427219 348 ntBASIC6.19□□□□□ -1.42
RHBDL3P58872 AC104837.2-201ENST00000427236 424 ntBASIC6.19□□□□□ -1.42
RHBDL3P58872 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.19□□□□□ -1.42
RHBDL3P58872 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC6.19□□□□□ -1.42
RHBDL3P58872 ZNF736P1Y-201ENST00000440402 1276 ntBASIC6.19□□□□□ -1.42
RHBDL3P58872 AL935212.3-201ENST00000450729 284 ntBASIC6.19□□□□□ -1.42
RHBDL3P58872 AL035407.2-201ENST00000454090 378 ntBASIC6.19□□□□□ -1.42
RHBDL3P58872 RPS3AP53-201ENST00000454716 778 ntBASIC6.19□□□□□ -1.42
RHBDL3P58872 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC6.19□□□□□ -1.42
RHBDL3P58872 AC108161.1-201ENST00000461060 402 ntBASIC6.19□□□□□ -1.42
RHBDL3P58872 RPL7P41-201ENST00000485823 957 ntBASIC6.19□□□□□ -1.42
RHBDL3P58872 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.19□□□□□ -1.42
RHBDL3P58872 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC6.19□□□□□ -1.42
RHBDL3P58872 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.19□□□□□ -1.42
RHBDL3P58872 CDH12P4-201ENST00000517835 295 ntBASIC6.19□□□□□ -1.42
RHBDL3P58872 CDH12P3-201ENST00000517935 295 ntBASIC6.19□□□□□ -1.42
RHBDL3P58872 CDH12P1-201ENST00000518435 295 ntBASIC6.19□□□□□ -1.42
RHBDL3P58872 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC6.19□□□□□ -1.42
RHBDL3P58872 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
RHBDL3P58872 BRD9P1-201ENST00000529855 560 ntBASIC6.19□□□□□ -1.42
RHBDL3P58872 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC6.19□□□□□ -1.42
RHBDL3P58872 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC6.19□□□□□ -1.42
RHBDL3P58872 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC6.19□□□□□ -1.42
RHBDL3P58872 MIR4480-201ENST00000582492 71 ntBASIC6.19□□□□□ -1.42
RHBDL3P58872 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC6.19□□□□□ -1.42
RHBDL3P58872 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC6.19□□□□□ -1.42
RHBDL3P58872 AC011626.1-201ENST00000604710 562 ntBASIC6.19□□□□□ -1.42
RHBDL3P58872 AC010200.2-201ENST00000605098 235 ntBASIC6.19□□□□□ -1.42
RHBDL3P58872 AP005229.2-201ENST00000609980 697 ntBASIC6.19□□□□□ -1.42
RHBDL3P58872 AC100827.5-201ENST00000615883 426 ntBASIC6.19□□□□□ -1.42
RHBDL3P58872 AL353662.3-201ENST00000625131 237 ntBASIC6.19□□□□□ -1.42
RHBDL3P58872 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC6.19□□□□□ -1.42
RHBDL3P58872 AC000095.2-202ENST00000637415 154 ntBASIC6.19□□□□□ -1.42
RHBDL3P58872 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
RHBDL3P58872 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.19□□□□□ -1.42
RHBDL3P58872 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RHBDL3P58872 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
RHBDL3P58872 AL451142.2-201ENST00000429076 2090 ntBASIC6.19□□□□□ -1.42
RHBDL3P58872 AL136520.1-201ENST00000600311 1322 ntBASIC6.19□□□□□ -1.42
RHBDL3P58872 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
RHBDL3P58872 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.19□□□□□ -1.42
RHBDL3P58872 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RHBDL3P58872 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RHBDL3P58872 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.18□□□□□ -1.42
RHBDL3P58872 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
RHBDL3P58872 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RHBDL3P58872 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RHBDL3P58872 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RHBDL3P58872 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
RHBDL3P58872 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RHBDL3P58872 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
RHBDL3P58872 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.18□□□□□ -1.42
RHBDL3P58872 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RHBDL3P58872 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.18□□□□□ -1.42
RHBDL3P58872 RN7SKP95-201ENST00000362860 303 ntBASIC6.18□□□□□ -1.42
RHBDL3P58872 RNA5SP27-201ENST00000363839 119 ntBASIC6.18□□□□□ -1.42
RHBDL3P58872 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
RHBDL3P58872 RNU6-1005P-201ENST00000384519 107 ntBASIC6.18□□□□□ -1.42
RHBDL3P58872 MIR589-201ENST00000385238 99 ntBASIC6.18□□□□□ -1.42
RHBDL3P58872 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
RHBDL3P58872 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC6.18□□□□□ -1.42
RHBDL3P58872 OR8V1P-201ENST00000395193 873 ntBASIC6.18□□□□□ -1.42
RHBDL3P58872 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC6.18□□□□□ -1.42
RHBDL3P58872 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.18□□□□□ -1.42
RHBDL3P58872 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.18□□□□□ -1.42
RHBDL3P58872 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.18□□□□□ -1.42
RHBDL3P58872 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC6.18□□□□□ -1.42
RHBDL3P58872 SLC9B1P4-201ENST00000421957 1288 ntBASIC6.18□□□□□ -1.42
RHBDL3P58872 NPM1P24-201ENST00000428039 894 ntBASIC6.18□□□□□ -1.42
RHBDL3P58872 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.18□□□□□ -1.42
RHBDL3P58872 PPIAP13-201ENST00000434706 478 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms