Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 OFD1P2Y-201ENST00000421895 1149 ntBASIC5.32□□□□□ -1.56
CLRN1P58418 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.32□□□□□ -1.56
CLRN1P58418 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLRN1P58418 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.32□□□□□ -1.56
CLRN1P58418 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC5.32□□□□□ -1.56
CLRN1P58418 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC5.32□□□□□ -1.56
CLRN1P58418 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLRN1P58418 RPS3AP38-201ENST00000435889 763 ntBASIC5.32□□□□□ -1.56
CLRN1P58418 AC023141.3-201ENST00000436698 278 ntBASIC5.32□□□□□ -1.56
CLRN1P58418 MTCYBP39-201ENST00000437562 491 ntBASIC5.32□□□□□ -1.56
CLRN1P58418 AL353662.1-201ENST00000439099 327 ntBASIC5.32□□□□□ -1.56
CLRN1P58418 MTCO1P19-201ENST00000443487 500 ntBASIC5.32□□□□□ -1.56
CLRN1P58418 EEF1B2P3-201ENST00000447718 678 ntBASIC5.32□□□□□ -1.56
CLRN1P58418 SDC4P-201ENST00000453285 601 ntBASIC5.32□□□□□ -1.56
CLRN1P58418 BX248409.1-201ENST00000455497 255 ntBASIC5.32□□□□□ -1.56
CLRN1P58418 VPS26AP1-201ENST00000483197 979 ntBASIC5.32□□□□□ -1.56
CLRN1P58418 TRBV5-2-201ENST00000489095 273 ntBASIC5.32□□□□□ -1.56
CLRN1P58418 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.32□□□□□ -1.56
CLRN1P58418 AC092349.1-201ENST00000504903 310 ntBASIC5.32□□□□□ -1.56
CLRN1P58418 OR7E99P-201ENST00000505750 922 ntBASIC5.32□□□□□ -1.56
CLRN1P58418 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
CLRN1P58418 PRMT5P1-201ENST00000514351 598 ntBASIC5.32□□□□□ -1.56
CLRN1P58418 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC5.32□□□□□ -1.56
CLRN1P58418 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.32□□□□□ -1.56
CLRN1P58418 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLRN1P58418 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.32□□□□□ -1.56
CLRN1P58418 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLRN1P58418 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.32□□□□□ -1.56
CLRN1P58418 ROCK1P1-201ENST00000573767 549 ntBASIC5.32□□□□□ -1.56
CLRN1P58418 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.32□□□□□ -1.56
CLRN1P58418 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.32□□□□□ -1.56
CLRN1P58418 MIR4701-201ENST00000583094 63 ntBASIC5.32□□□□□ -1.56
CLRN1P58418 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.32□□□□□ -1.56
CLRN1P58418 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.32□□□□□ -1.56
CLRN1P58418 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.32□□□□□ -1.56
CLRN1P58418 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.32□□□□□ -1.56
CLRN1P58418 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.32□□□□□ -1.56
CLRN1P58418 AP001267.4-201ENST00000602598 545 ntBASIC5.32□□□□□ -1.56
CLRN1P58418 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.32□□□□□ -1.56
CLRN1P58418 AC092354.2-201ENST00000607786 514 ntBASIC5.32□□□□□ -1.56
CLRN1P58418 AC005332.10-201ENST00000612725 619 ntBASIC5.32□□□□□ -1.56
CLRN1P58418 AL353726.1-201ENST00000614041 1000 ntBASIC5.32□□□□□ -1.56
CLRN1P58418 AC244100.4-201ENST00000617747 388 ntBASIC5.32□□□□□ -1.56
CLRN1P58418 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.32□□□□□ -1.56
CLRN1P58418 AC009878.1-201ENST00000621819 340 ntBASIC5.32□□□□□ -1.56
CLRN1P58418 AP001052.1-201ENST00000626421 99 ntBASIC5.32□□□□□ -1.56
CLRN1P58418 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLRN1P58418 HSPD1P9-201ENST00000420325 1636 ntBASIC5.32□□□□□ -1.56
CLRN1P58418 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLRN1P58418 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLRN1P58418 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.32□□□□□ -1.56
CLRN1P58418 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLRN1P58418 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.32□□□□□ -1.56
CLRN1P58418 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLRN1P58418 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLRN1P58418 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLRN1P58418 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CLRN1P58418 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLRN1P58418 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLRN1P58418 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLRN1P58418 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLRN1P58418 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.31□□□□□ -1.56
CLRN1P58418 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLRN1P58418 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLRN1P58418 AC003973.3-201ENST00000624863 2822 ntBASIC5.31□□□□□ -1.56
CLRN1P58418 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.31□□□□□ -1.56
CLRN1P58418 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLRN1P58418 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC5.31□□□□□ -1.56
CLRN1P58418 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CLRN1P58418 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLRN1P58418 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLRN1P58418 RNU6-253P-201ENST00000384730 105 ntBASIC5.31□□□□□ -1.56
CLRN1P58418 MIR16-1-201ENST00000385271 89 ntBASIC5.31□□□□□ -1.56
CLRN1P58418 VDAC2P1-201ENST00000399358 958 ntBASIC5.31□□□□□ -1.56
CLRN1P58418 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLRN1P58418 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLRN1P58418 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.31□□□□□ -1.56
CLRN1P58418 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.31□□□□□ -1.56
CLRN1P58418 OFD1P11Y-201ENST00000418213 1177 ntBASIC5.31□□□□□ -1.56
CLRN1P58418 AC234781.4-201ENST00000419384 244 ntBASIC5.31□□□□□ -1.56
CLRN1P58418 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.31□□□□□ -1.56
CLRN1P58418 RNGTTP1-201ENST00000420965 728 ntBASIC5.31□□□□□ -1.56
CLRN1P58418 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.31□□□□□ -1.56
CLRN1P58418 AC099677.3-201ENST00000427081 395 ntBASIC5.31□□□□□ -1.56
CLRN1P58418 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.31□□□□□ -1.56
CLRN1P58418 RPSAP65-201ENST00000429660 595 ntBASIC5.31□□□□□ -1.56
CLRN1P58418 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.31□□□□□ -1.56
CLRN1P58418 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.31□□□□□ -1.56
CLRN1P58418 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.31□□□□□ -1.56
CLRN1P58418 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.31□□□□□ -1.56
CLRN1P58418 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLRN1P58418 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.31□□□□□ -1.56
CLRN1P58418 COX6CP18-201ENST00000448769 222 ntBASIC5.31□□□□□ -1.56
CLRN1P58418 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC5.31□□□□□ -1.56
CLRN1P58418 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.31□□□□□ -1.56
CLRN1P58418 AC009963.3-201ENST00000458090 486 ntBASIC5.31□□□□□ -1.56
CLRN1P58418 RNU7-27P-201ENST00000459281 62 ntBASIC5.31□□□□□ -1.56
CLRN1P58418 MTND1P16-201ENST00000465177 898 ntBASIC5.31□□□□□ -1.56
CLRN1P58418 PFN1P6-201ENST00000476786 399 ntBASIC5.31□□□□□ -1.56
CLRN1P58418 AC092865.4-201ENST00000477936 615 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 410 ms