Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC4.57□□□□□ -1.68
VSX2P58304 AC005154.2-201ENST00000438110 379 ntBASIC4.57□□□□□ -1.68
VSX2P58304 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.57□□□□□ -1.68
VSX2P58304 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.57□□□□□ -1.68
VSX2P58304 AC006967.1-201ENST00000467608 589 ntBASIC4.57□□□□□ -1.68
VSX2P58304 RPS29P22-201ENST00000472363 168 ntBASIC4.57□□□□□ -1.68
VSX2P58304 AC073358.1-201ENST00000505671 684 ntBASIC4.57□□□□□ -1.68
VSX2P58304 RPS27AP18-201ENST00000515536 459 ntBASIC4.57□□□□□ -1.68
VSX2P58304 RNU6-943P-201ENST00000516960 98 ntBASIC4.57□□□□□ -1.68
VSX2P58304 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.57□□□□□ -1.68
VSX2P58304 MIR5699-201ENST00000578903 90 ntBASIC4.57□□□□□ -1.68
VSX2P58304 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.57□□□□□ -1.68
VSX2P58304 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.57□□□□□ -1.68
VSX2P58304 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.57□□□□□ -1.68
VSX2P58304 AL161616.1-201ENST00000611867 286 ntBASIC4.57□□□□□ -1.68
VSX2P58304 AL354950.1-201ENST00000614150 568 ntBASIC4.57□□□□□ -1.68
VSX2P58304 AC015914.2-201ENST00000618167 288 ntBASIC4.57□□□□□ -1.68
VSX2P58304 MIR6853-201ENST00000619642 74 ntBASIC4.57□□□□□ -1.68
VSX2P58304 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VSX2P58304 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.57□□□□□ -1.68
VSX2P58304 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
VSX2P58304 AC107068.1-201ENST00000563286 4218 ntBASIC4.57□□□□□ -1.68
VSX2P58304 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
VSX2P58304 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.57□□□□□ -1.68
VSX2P58304 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
VSX2P58304 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VSX2P58304 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
VSX2P58304 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VSX2P58304 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VSX2P58304 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
VSX2P58304 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VSX2P58304 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.56□□□□□ -1.68
VSX2P58304 AL442639.1-201ENST00000625030 1899 ntBASIC4.56□□□□□ -1.68
VSX2P58304 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.56□□□□□ -1.68
VSX2P58304 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.56□□□□□ -1.68
VSX2P58304 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VSX2P58304 DDX18P5-201ENST00000534547 1306 ntBASIC4.56□□□□□ -1.68
VSX2P58304 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.56□□□□□ -1.68
VSX2P58304 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
VSX2P58304 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VSX2P58304 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.56□□□□□ -1.68
VSX2P58304 BX510359.2-201ENST00000417920 305 ntBASIC4.56□□□□□ -1.68
VSX2P58304 RGS17P1-201ENST00000423358 553 ntBASIC4.56□□□□□ -1.68
VSX2P58304 FABP7P1-201ENST00000424004 391 ntBASIC4.56□□□□□ -1.68
VSX2P58304 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.56□□□□□ -1.68
VSX2P58304 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.56□□□□□ -1.68
VSX2P58304 H2AFZP6-201ENST00000444403 394 ntBASIC4.56□□□□□ -1.68
VSX2P58304 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.56□□□□□ -1.68
VSX2P58304 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.56□□□□□ -1.68
VSX2P58304 RPL21P6-201ENST00000479171 504 ntBASIC4.56□□□□□ -1.68
VSX2P58304 TRBV8-1-201ENST00000481590 279 ntBASIC4.56□□□□□ -1.68
VSX2P58304 AC007686.1-201ENST00000488511 463 ntBASIC4.56□□□□□ -1.68
VSX2P58304 SCARNA22-201ENST00000503991 125 ntBASIC4.56□□□□□ -1.68
VSX2P58304 AC138938.1-201ENST00000515431 782 ntBASIC4.56□□□□□ -1.68
VSX2P58304 RNA5SP228-201ENST00000516232 133 ntBASIC4.56□□□□□ -1.68
VSX2P58304 RNU1-6P-201ENST00000516290 144 ntBASIC4.56□□□□□ -1.68
VSX2P58304 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.56□□□□□ -1.68
VSX2P58304 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VSX2P58304 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC4.56□□□□□ -1.68
VSX2P58304 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.56□□□□□ -1.68
VSX2P58304 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.56□□□□□ -1.68
VSX2P58304 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.56□□□□□ -1.68
VSX2P58304 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.56□□□□□ -1.68
VSX2P58304 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.56□□□□□ -1.68
VSX2P58304 AC098935.2-201ENST00000604222 466 ntBASIC4.56□□□□□ -1.68
VSX2P58304 MIR6798-201ENST00000612887 67 ntBASIC4.56□□□□□ -1.68
VSX2P58304 AC022960.2-201ENST00000616300 666 ntBASIC4.56□□□□□ -1.68
VSX2P58304 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.56□□□□□ -1.68
VSX2P58304 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.56□□□□□ -1.68
VSX2P58304 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VSX2P58304 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VSX2P58304 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VSX2P58304 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.56□□□□□ -1.68
VSX2P58304 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
VSX2P58304 SMG1P6-201ENST00000532337 2930 ntBASIC4.56□□□□□ -1.68
VSX2P58304 AC010928.1-201ENST00000592477 1447 ntBASIC4.55□□□□□ -1.68
VSX2P58304 RBPJP2-201ENST00000618187 1444 ntBASIC4.55□□□□□ -1.68
VSX2P58304 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
VSX2P58304 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
VSX2P58304 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VSX2P58304 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VSX2P58304 AL590240.1-201ENST00000334118 313 ntBASIC4.55□□□□□ -1.68
VSX2P58304 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
VSX2P58304 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
VSX2P58304 CYB5AP4-201ENST00000396692 399 ntBASIC4.55□□□□□ -1.68
VSX2P58304 MIR298-201ENST00000401212 88 ntBASIC4.55□□□□□ -1.68
VSX2P58304 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.55□□□□□ -1.68
VSX2P58304 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.55□□□□□ -1.68
VSX2P58304 AL645608.4-201ENST00000423619 154 ntBASIC4.55□□□□□ -1.68
VSX2P58304 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.55□□□□□ -1.68
VSX2P58304 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.55□□□□□ -1.68
VSX2P58304 AC016831.4-201ENST00000438302 307 ntBASIC4.55□□□□□ -1.68
VSX2P58304 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC4.55□□□□□ -1.68
VSX2P58304 AC104849.1-201ENST00000462623 405 ntBASIC4.55□□□□□ -1.68
VSX2P58304 AC011005.3-201ENST00000491624 395 ntBASIC4.55□□□□□ -1.68
VSX2P58304 ENPP7P9-201ENST00000514456 627 ntBASIC4.55□□□□□ -1.68
VSX2P58304 RNA5SP303-201ENST00000516192 130 ntBASIC4.55□□□□□ -1.68
VSX2P58304 RNU2-30P-201ENST00000516209 141 ntBASIC4.55□□□□□ -1.68
VSX2P58304 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.55□□□□□ -1.68
VSX2P58304 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms