Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PKNOX1P55347 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
PKNOX1P55347 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PKNOX1P55347 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PKNOX1P55347 AL590763.1-201ENST00000398297 1545 ntBASIC4.62□□□□□ -1.67
PKNOX1P55347 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.62□□□□□ -1.67
PKNOX1P55347 RN7SKP104-201ENST00000362605 328 ntBASIC4.62□□□□□ -1.67
PKNOX1P55347 RN7SKP224-201ENST00000364140 325 ntBASIC4.62□□□□□ -1.67
PKNOX1P55347 RNU6-171P-201ENST00000384354 107 ntBASIC4.62□□□□□ -1.67
PKNOX1P55347 SNORA68.2-201ENST00000391263 128 ntBASIC4.62□□□□□ -1.67
PKNOX1P55347 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.62□□□□□ -1.67
PKNOX1P55347 HMGB3P7-201ENST00000400214 611 ntBASIC4.62□□□□□ -1.67
PKNOX1P55347 MIR921-201ENST00000401133 56 ntBASIC4.62□□□□□ -1.67
PKNOX1P55347 CASKP1-201ENST00000412870 582 ntBASIC4.62□□□□□ -1.67
PKNOX1P55347 AC009237.10-201ENST00000414112 510 ntBASIC4.62□□□□□ -1.67
PKNOX1P55347 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PKNOX1P55347 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.62□□□□□ -1.67
PKNOX1P55347 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.62□□□□□ -1.67
PKNOX1P55347 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.62□□□□□ -1.67
PKNOX1P55347 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.62□□□□□ -1.67
PKNOX1P55347 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.62□□□□□ -1.67
PKNOX1P55347 ARL4AP3-201ENST00000441452 574 ntBASIC4.62□□□□□ -1.67
PKNOX1P55347 MYO5BP2-201ENST00000449815 1277 ntBASIC4.62□□□□□ -1.67
PKNOX1P55347 AL645937.3-201ENST00000453647 936 ntBASIC4.62□□□□□ -1.67
PKNOX1P55347 MTND6P32-201ENST00000457611 483 ntBASIC4.62□□□□□ -1.67
PKNOX1P55347 RN7SL817P-201ENST00000480777 288 ntBASIC4.62□□□□□ -1.67
PKNOX1P55347 AC104971.1-201ENST00000495117 578 ntBASIC4.62□□□□□ -1.67
PKNOX1P55347 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PKNOX1P55347 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.62□□□□□ -1.67
PKNOX1P55347 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.62□□□□□ -1.67
PKNOX1P55347 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.62□□□□□ -1.67
PKNOX1P55347 RPL21P7-201ENST00000557463 483 ntBASIC4.62□□□□□ -1.67
PKNOX1P55347 AC018552.1-201ENST00000562099 811 ntBASIC4.62□□□□□ -1.67
PKNOX1P55347 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.62□□□□□ -1.67
PKNOX1P55347 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.62□□□□□ -1.67
PKNOX1P55347 ATP5J2P6-201ENST00000565203 266 ntBASIC4.62□□□□□ -1.67
PKNOX1P55347 AC122134.1-201ENST00000565664 1104 ntBASIC4.62□□□□□ -1.67
PKNOX1P55347 SNORD39.2-201ENST00000579995 76 ntBASIC4.62□□□□□ -1.67
PKNOX1P55347 MIR1269B-201ENST00000580405 75 ntBASIC4.62□□□□□ -1.67
PKNOX1P55347 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.62□□□□□ -1.67
PKNOX1P55347 AC005520.3-201ENST00000602874 370 ntBASIC4.62□□□□□ -1.67
PKNOX1P55347 AC020910.3-201ENST00000603701 874 ntBASIC4.62□□□□□ -1.67
PKNOX1P55347 AL121612.2-201ENST00000612261 482 ntBASIC4.62□□□□□ -1.67
PKNOX1P55347 AC022467.1-201ENST00000614738 749 ntBASIC4.62□□□□□ -1.67
PKNOX1P55347 AC140113.4-201ENST00000622087 222 ntBASIC4.62□□□□□ -1.67
PKNOX1P55347 AL596275.2-204ENST00000641628 552 ntBASIC4.62□□□□□ -1.67
PKNOX1P55347 AL596275.2-206ENST00000641957 626 ntBASIC4.62□□□□□ -1.67
PKNOX1P55347 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PKNOX1P55347 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PKNOX1P55347 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PKNOX1P55347 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.62□□□□□ -1.67
PKNOX1P55347 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PKNOX1P55347 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PKNOX1P55347 AL136164.3-201ENST00000624429 3978 ntBASIC4.62□□□□□ -1.67
PKNOX1P55347 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
PKNOX1P55347 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PKNOX1P55347 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
PKNOX1P55347 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PKNOX1P55347 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PKNOX1P55347 OR56B2P-201ENST00000317102 954 ntBASIC4.61□□□□□ -1.67
PKNOX1P55347 RNU1-20P-201ENST00000363314 162 ntBASIC4.61□□□□□ -1.67
PKNOX1P55347 RNU6-697P-201ENST00000363348 107 ntBASIC4.61□□□□□ -1.67
PKNOX1P55347 RNU1-106P-201ENST00000384382 164 ntBASIC4.61□□□□□ -1.67
PKNOX1P55347 RNU6-1263P-201ENST00000384601 106 ntBASIC4.61□□□□□ -1.67
PKNOX1P55347 AL590762.2-201ENST00000395798 571 ntBASIC4.61□□□□□ -1.67
PKNOX1P55347 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.61□□□□□ -1.67
PKNOX1P55347 RN7SKP273-201ENST00000411392 314 ntBASIC4.61□□□□□ -1.67
PKNOX1P55347 VDAC1P9-201ENST00000412766 841 ntBASIC4.61□□□□□ -1.67
PKNOX1P55347 AL358176.3-201ENST00000420757 454 ntBASIC4.61□□□□□ -1.67
PKNOX1P55347 GLUD1P9-201ENST00000420997 1173 ntBASIC4.61□□□□□ -1.67
PKNOX1P55347 AC079355.1-201ENST00000421770 223 ntBASIC4.61□□□□□ -1.67
PKNOX1P55347 OR2AM1P-201ENST00000422137 422 ntBASIC4.61□□□□□ -1.67
PKNOX1P55347 AL645608.4-201ENST00000423619 154 ntBASIC4.61□□□□□ -1.67
PKNOX1P55347 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.61□□□□□ -1.67
PKNOX1P55347 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PKNOX1P55347 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.61□□□□□ -1.67
PKNOX1P55347 AC025164.1-201ENST00000496249 478 ntBASIC4.61□□□□□ -1.67
PKNOX1P55347 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PKNOX1P55347 RNU1-6P-201ENST00000516290 144 ntBASIC4.61□□□□□ -1.67
PKNOX1P55347 RN7SKP147-201ENST00000517154 244 ntBASIC4.61□□□□□ -1.67
PKNOX1P55347 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.61□□□□□ -1.67
PKNOX1P55347 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.61□□□□□ -1.67
PKNOX1P55347 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.61□□□□□ -1.67
PKNOX1P55347 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.61□□□□□ -1.67
PKNOX1P55347 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.61□□□□□ -1.67
PKNOX1P55347 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.61□□□□□ -1.67
PKNOX1P55347 MIR5699-201ENST00000578903 90 ntBASIC4.61□□□□□ -1.67
PKNOX1P55347 RN7SL176P-201ENST00000580352 264 ntBASIC4.61□□□□□ -1.67
PKNOX1P55347 AC022726.1-201ENST00000587475 207 ntBASIC4.61□□□□□ -1.67
PKNOX1P55347 AL133406.3-201ENST00000606817 541 ntBASIC4.61□□□□□ -1.67
PKNOX1P55347 AC117490.2-201ENST00000610042 594 ntBASIC4.61□□□□□ -1.67
PKNOX1P55347 AC004232.3-201ENST00000622977 525 ntBASIC4.61□□□□□ -1.67
PKNOX1P55347 AL359757.1-201ENST00000623176 255 ntBASIC4.61□□□□□ -1.67
PKNOX1P55347 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
PKNOX1P55347 AC104118.1-201ENST00000607625 1589 ntBASIC4.61□□□□□ -1.67
PKNOX1P55347 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PKNOX1P55347 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
PKNOX1P55347 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PKNOX1P55347 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PKNOX1P55347 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms