Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.92□□□□□ -1.62
CDH12P55289 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.92□□□□□ -1.62
CDH12P55289 SCARNA16.4-201ENST00000516956 187 ntBASIC4.92□□□□□ -1.62
CDH12P55289 RN7SKP99-201ENST00000517028 307 ntBASIC4.92□□□□□ -1.62
CDH12P55289 AC023538.1-201ENST00000534576 736 ntBASIC4.92□□□□□ -1.62
CDH12P55289 AC008126.1-201ENST00000549019 480 ntBASIC4.92□□□□□ -1.62
CDH12P55289 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.92□□□□□ -1.62
CDH12P55289 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CDH12P55289 AC010547.6-201ENST00000571789 193 ntBASIC4.92□□□□□ -1.62
CDH12P55289 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.92□□□□□ -1.62
CDH12P55289 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.92□□□□□ -1.62
CDH12P55289 AC006363.1-201ENST00000603806 463 ntBASIC4.92□□□□□ -1.62
CDH12P55289 ELOCP35-201ENST00000604289 336 ntBASIC4.92□□□□□ -1.62
CDH12P55289 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CDH12P55289 PART1_2.1-201ENST00000612397 250 ntBASIC4.92□□□□□ -1.62
CDH12P55289 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.92□□□□□ -1.62
CDH12P55289 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDH12P55289 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.92□□□□□ -1.62
CDH12P55289 NXF4-202ENST00000416098 1465 ntBASIC4.92□□□□□ -1.62
CDH12P55289 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDH12P55289 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
CDH12P55289 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDH12P55289 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDH12P55289 CIR1P2-201ENST00000514821 1342 ntBASIC4.92□□□□□ -1.62
CDH12P55289 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.92□□□□□ -1.62
CDH12P55289 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CDH12P55289 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDH12P55289 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CDH12P55289 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDH12P55289 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
CDH12P55289 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDH12P55289 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDH12P55289 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDH12P55289 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDH12P55289 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
CDH12P55289 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDH12P55289 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.91□□□□□ -1.62
CDH12P55289 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
CDH12P55289 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDH12P55289 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDH12P55289 MIR142-201ENST00000384835 87 ntBASIC4.91□□□□□ -1.62
CDH12P55289 HMGB1P13-201ENST00000406019 642 ntBASIC4.91□□□□□ -1.62
CDH12P55289 RNU2-18P-201ENST00000411224 162 ntBASIC4.91□□□□□ -1.62
CDH12P55289 LIPT1P1-201ENST00000415870 1186 ntBASIC4.91□□□□□ -1.62
CDH12P55289 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.91□□□□□ -1.62
CDH12P55289 AC005005.2-201ENST00000420779 380 ntBASIC4.91□□□□□ -1.62
CDH12P55289 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.91□□□□□ -1.62
CDH12P55289 IPPKP1-201ENST00000422501 768 ntBASIC4.91□□□□□ -1.62
CDH12P55289 PRUNEP1-201ENST00000425846 705 ntBASIC4.91□□□□□ -1.62
CDH12P55289 FO393419.3-201ENST00000428741 282 ntBASIC4.91□□□□□ -1.62
CDH12P55289 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.91□□□□□ -1.62
CDH12P55289 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.91□□□□□ -1.62
CDH12P55289 HSFY3P-201ENST00000444242 1191 ntBASIC4.91□□□□□ -1.62
CDH12P55289 AC097499.1-201ENST00000444277 208 ntBASIC4.91□□□□□ -1.62
CDH12P55289 CYCSP24-201ENST00000445119 316 ntBASIC4.91□□□□□ -1.62
CDH12P55289 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDH12P55289 AL672138.1-201ENST00000450604 1015 ntBASIC4.91□□□□□ -1.62
CDH12P55289 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.91□□□□□ -1.62
CDH12P55289 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.91□□□□□ -1.62
CDH12P55289 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.91□□□□□ -1.62
CDH12P55289 RPL6P9-201ENST00000466502 859 ntBASIC4.91□□□□□ -1.62
CDH12P55289 AC007998.1-201ENST00000474156 672 ntBASIC4.91□□□□□ -1.62
CDH12P55289 RN7SL814P-201ENST00000487715 300 ntBASIC4.91□□□□□ -1.62
CDH12P55289 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.91□□□□□ -1.62
CDH12P55289 MTND4LP2-201ENST00000502312 285 ntBASIC4.91□□□□□ -1.62
CDH12P55289 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.91□□□□□ -1.62
CDH12P55289 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.91□□□□□ -1.62
CDH12P55289 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.91□□□□□ -1.62
CDH12P55289 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.91□□□□□ -1.62
CDH12P55289 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.91□□□□□ -1.62
CDH12P55289 RNU6-1028P-201ENST00000517164 93 ntBASIC4.91□□□□□ -1.62
CDH12P55289 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC4.91□□□□□ -1.62
CDH12P55289 AP004607.2-201ENST00000533949 322 ntBASIC4.91□□□□□ -1.62
CDH12P55289 AC011611.5-201ENST00000552477 578 ntBASIC4.91□□□□□ -1.62
CDH12P55289 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.91□□□□□ -1.62
CDH12P55289 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.91□□□□□ -1.62
CDH12P55289 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDH12P55289 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.91□□□□□ -1.62
CDH12P55289 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.91□□□□□ -1.62
CDH12P55289 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.91□□□□□ -1.62
CDH12P55289 AC024060.1-201ENST00000607052 494 ntBASIC4.91□□□□□ -1.62
CDH12P55289 OR2BH1P-201ENST00000608850 864 ntBASIC4.91□□□□□ -1.62
CDH12P55289 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDH12P55289 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.91□□□□□ -1.62
CDH12P55289 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDH12P55289 AC011330.2-201ENST00000621680 635 ntBASIC4.91□□□□□ -1.62
CDH12P55289 AP002791.1-201ENST00000623291 381 ntBASIC4.91□□□□□ -1.62
CDH12P55289 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.91□□□□□ -1.62
CDH12P55289 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC4.91□□□□□ -1.62
CDH12P55289 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
CDH12P55289 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CDH12P55289 AC139713.2-210ENST00000641741 992 ntBASIC4.91□□□□□ -1.62
CDH12P55289 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDH12P55289 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
CDH12P55289 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDH12P55289 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CDH12P55289 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.91□□□□□ -1.62
CDH12P55289 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDH12P55289 AC023421.1-201ENST00000590535 1785 ntBASIC4.91□□□□□ -1.62
CDH12P55289 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms