Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC6.9□□□□□ -1.3
USP11P51784 AC005225.5-201ENST00000623547 2225 ntBASIC6.9□□□□□ -1.3
USP11P51784 AC016583.1-201ENST00000624221 2431 ntBASIC6.9□□□□□ -1.31
USP11P51784 ELF2P3-201ENST00000445099 1506 ntBASIC6.9□□□□□ -1.31
USP11P51784 ANKRD20A10P-201ENST00000457591 1515 ntBASIC6.9□□□□□ -1.31
USP11P51784 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.9□□□□□ -1.31
USP11P51784 AC008627.1-201ENST00000517511 1704 ntBASIC6.9□□□□□ -1.31
USP11P51784 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC6.9□□□□□ -1.31
USP11P51784 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
USP11P51784 AC007114.2-201ENST00000576014 4281 ntBASIC6.9□□□□□ -1.31
USP11P51784 AC073365.1-203ENST00000641055 1992 ntBASIC6.89□□□□□ -1.31
USP11P51784 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.89□□□□□ -1.31
USP11P51784 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
USP11P51784 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
USP11P51784 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
USP11P51784 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.89□□□□□ -1.31
USP11P51784 AC093297.3-201ENST00000607056 2517 ntBASIC6.89□□□□□ -1.31
USP11P51784 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
USP11P51784 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.89□□□□□ -1.31
USP11P51784 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
USP11P51784 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
USP11P51784 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
USP11P51784 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
USP11P51784 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.89□□□□□ -1.31
USP11P51784 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
USP11P51784 RNA5SP433-201ENST00000364491 114 ntBASIC6.89□□□□□ -1.31
USP11P51784 RNU6-259P-201ENST00000383999 107 ntBASIC6.89□□□□□ -1.31
USP11P51784 AL360271.1-201ENST00000395679 510 ntBASIC6.89□□□□□ -1.31
USP11P51784 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.89□□□□□ -1.31
USP11P51784 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC6.89□□□□□ -1.31
USP11P51784 PAICSP7-201ENST00000419829 962 ntBASIC6.89□□□□□ -1.31
USP11P51784 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.89□□□□□ -1.31
USP11P51784 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.89□□□□□ -1.31
USP11P51784 TRIM60P3Y-201ENST00000432201 673 ntBASIC6.89□□□□□ -1.31
USP11P51784 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.89□□□□□ -1.31
USP11P51784 AC110602.1-201ENST00000437414 318 ntBASIC6.89□□□□□ -1.31
USP11P51784 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.89□□□□□ -1.31
USP11P51784 ATP5LP2-201ENST00000440646 311 ntBASIC6.89□□□□□ -1.31
USP11P51784 NANOGNBP1-201ENST00000448444 480 ntBASIC6.89□□□□□ -1.31
USP11P51784 AC016027.4-201ENST00000450866 277 ntBASIC6.89□□□□□ -1.31
USP11P51784 CFL1P4-201ENST00000451536 498 ntBASIC6.89□□□□□ -1.31
USP11P51784 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
USP11P51784 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.89□□□□□ -1.31
USP11P51784 AC098847.1-201ENST00000473094 348 ntBASIC6.89□□□□□ -1.31
USP11P51784 RPL7P18-201ENST00000478965 734 ntBASIC6.89□□□□□ -1.31
USP11P51784 AC079382.1-201ENST00000493346 557 ntBASIC6.89□□□□□ -1.31
USP11P51784 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
USP11P51784 FAM92A1P2-202ENST00000504766 877 ntBASIC6.89□□□□□ -1.31
USP11P51784 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
USP11P51784 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.89□□□□□ -1.31
USP11P51784 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.89□□□□□ -1.31
USP11P51784 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC6.89□□□□□ -1.31
USP11P51784 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC6.89□□□□□ -1.31
USP11P51784 PRELID3BP4-201ENST00000515476 571 ntBASIC6.89□□□□□ -1.31
USP11P51784 snoZ278.1-201ENST00000517059 112 ntBASIC6.89□□□□□ -1.31
USP11P51784 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.89□□□□□ -1.31
USP11P51784 AP001207.1-201ENST00000524051 481 ntBASIC6.89□□□□□ -1.31
USP11P51784 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC6.89□□□□□ -1.31
USP11P51784 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.89□□□□□ -1.31
USP11P51784 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
USP11P51784 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.89□□□□□ -1.31
USP11P51784 RPA2P1-201ENST00000556557 721 ntBASIC6.89□□□□□ -1.31
USP11P51784 ZNF519P2-201ENST00000557032 169 ntBASIC6.89□□□□□ -1.31
USP11P51784 CYCSP38-201ENST00000559840 322 ntBASIC6.89□□□□□ -1.31
USP11P51784 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.89□□□□□ -1.31
USP11P51784 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.89□□□□□ -1.31
USP11P51784 AP005119.1-201ENST00000580956 292 ntBASIC6.89□□□□□ -1.31
USP11P51784 MIR4310-201ENST00000582950 57 ntBASIC6.89□□□□□ -1.31
USP11P51784 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.89□□□□□ -1.31
USP11P51784 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.89□□□□□ -1.31
USP11P51784 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
USP11P51784 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC6.89□□□□□ -1.31
USP11P51784 AC015871.2-201ENST00000603605 948 ntBASIC6.89□□□□□ -1.31
USP11P51784 AC009994.1-201ENST00000606889 253 ntBASIC6.89□□□□□ -1.31
USP11P51784 Y_RNA.804-201ENST00000615262 101 ntBASIC6.89□□□□□ -1.31
USP11P51784 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
USP11P51784 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.89□□□□□ -1.31
USP11P51784 MTND1P37-201ENST00000636562 264 ntBASIC6.89□□□□□ -1.31
USP11P51784 AC087565.3-203ENST00000641018 837 ntBASIC6.89□□□□□ -1.31
USP11P51784 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.89□□□□□ -1.31
USP11P51784 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
USP11P51784 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
USP11P51784 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.89□□□□□ -1.31
USP11P51784 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
USP11P51784 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
USP11P51784 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
USP11P51784 AL033543.1-201ENST00000623440 13454 ntBASIC6.88□□□□□ -1.31
USP11P51784 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
USP11P51784 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.88□□□□□ -1.31
USP11P51784 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
USP11P51784 GNL2P1-201ENST00000451274 2190 ntBASIC6.88□□□□□ -1.31
USP11P51784 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
USP11P51784 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.88□□□□□ -1.31
USP11P51784 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.88□□□□□ -1.31
USP11P51784 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.88□□□□□ -1.31
USP11P51784 UGT2B24P-201ENST00000514441 1597 ntBASIC6.88□□□□□ -1.31
USP11P51784 QRSL1P1-201ENST00000400977 1540 ntBASIC6.88□□□□□ -1.31
USP11P51784 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC6.88□□□□□ -1.31
USP11P51784 RBPJP7-201ENST00000442803 1447 ntBASIC6.88□□□□□ -1.31
USP11P51784 RBPJP5-201ENST00000449433 1447 ntBASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms