Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.7□□□□□ -1.66
RORAP35398 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.7□□□□□ -1.66
RORAP35398 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RORAP35398 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
RORAP35398 GTF2IP5-201ENST00000414608 731 ntBASIC4.7□□□□□ -1.66
RORAP35398 AC096644.3-201ENST00000416788 338 ntBASIC4.7□□□□□ -1.66
RORAP35398 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.7□□□□□ -1.66
RORAP35398 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.7□□□□□ -1.66
RORAP35398 MTCO1P51-201ENST00000427672 1060 ntBASIC4.7□□□□□ -1.66
RORAP35398 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.7□□□□□ -1.66
RORAP35398 AL450023.3-201ENST00000440592 271 ntBASIC4.7□□□□□ -1.66
RORAP35398 RPL7AP61-201ENST00000443410 636 ntBASIC4.7□□□□□ -1.66
RORAP35398 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.7□□□□□ -1.66
RORAP35398 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RORAP35398 HMGB1P4-201ENST00000455362 567 ntBASIC4.7□□□□□ -1.66
RORAP35398 RPS29P33-201ENST00000456717 146 ntBASIC4.7□□□□□ -1.66
RORAP35398 AL591473.1-201ENST00000464297 313 ntBASIC4.7□□□□□ -1.66
RORAP35398 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.7□□□□□ -1.66
RORAP35398 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RORAP35398 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.7□□□□□ -1.66
RORAP35398 MORF4L1P3-201ENST00000525966 950 ntBASIC4.7□□□□□ -1.66
RORAP35398 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.7□□□□□ -1.66
RORAP35398 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.7□□□□□ -1.66
RORAP35398 AC008147.3-201ENST00000548666 354 ntBASIC4.7□□□□□ -1.66
RORAP35398 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.7□□□□□ -1.66
RORAP35398 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.7□□□□□ -1.66
RORAP35398 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.7□□□□□ -1.66
RORAP35398 TVP23CP2-201ENST00000571473 623 ntBASIC4.7□□□□□ -1.66
RORAP35398 MIR4330-201ENST00000579077 105 ntBASIC4.7□□□□□ -1.66
RORAP35398 AC091042.1-201ENST00000579213 173 ntBASIC4.7□□□□□ -1.66
RORAP35398 MIR4270-201ENST00000581799 70 ntBASIC4.7□□□□□ -1.66
RORAP35398 AC020910.3-201ENST00000603701 874 ntBASIC4.7□□□□□ -1.66
RORAP35398 AC087283.1-201ENST00000604029 1074 ntBASIC4.7□□□□□ -1.66
RORAP35398 uc_338.18-201ENST00000615451 175 ntBASIC4.7□□□□□ -1.66
RORAP35398 AC087821.1-201ENST00000623639 567 ntBASIC4.7□□□□□ -1.66
RORAP35398 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.7□□□□□ -1.66
RORAP35398 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.7□□□□□ -1.66
RORAP35398 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.7□□□□□ -1.66
RORAP35398 AL596275.2-204ENST00000641628 552 ntBASIC4.7□□□□□ -1.66
RORAP35398 AL596275.2-206ENST00000641957 626 ntBASIC4.7□□□□□ -1.66
RORAP35398 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.7□□□□□ -1.66
RORAP35398 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RORAP35398 AC063976.2-201ENST00000425667 3556 ntBASIC4.7□□□□□ -1.66
RORAP35398 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.7□□□□□ -1.66
RORAP35398 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.7□□□□□ -1.66
RORAP35398 MFSD8-216ENST00000641147 4009 ntBASIC4.69□□□□□ -1.66
RORAP35398 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.69□□□□□ -1.66
RORAP35398 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
RORAP35398 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RORAP35398 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RORAP35398 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.69□□□□□ -1.66
RORAP35398 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RORAP35398 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
RORAP35398 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
RORAP35398 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RORAP35398 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RORAP35398 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
RORAP35398 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RORAP35398 SNORA70.10-201ENST00000384515 134 ntBASIC4.69□□□□□ -1.66
RORAP35398 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RORAP35398 RPL10P10-201ENST00000403509 664 ntBASIC4.69□□□□□ -1.66
RORAP35398 U3.32-201ENST00000408116 212 ntBASIC4.69□□□□□ -1.66
RORAP35398 RN7SKP100-201ENST00000411258 284 ntBASIC4.69□□□□□ -1.66
RORAP35398 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.69□□□□□ -1.66
RORAP35398 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.69□□□□□ -1.66
RORAP35398 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.69□□□□□ -1.66
RORAP35398 MTCO3P17-201ENST00000443775 513 ntBASIC4.69□□□□□ -1.66
RORAP35398 AC099063.2-201ENST00000446360 662 ntBASIC4.69□□□□□ -1.66
RORAP35398 AC243772.1-201ENST00000451620 410 ntBASIC4.69□□□□□ -1.66
RORAP35398 AL513533.1-201ENST00000453728 415 ntBASIC4.69□□□□□ -1.66
RORAP35398 RPS17P2-201ENST00000461663 408 ntBASIC4.69□□□□□ -1.66
RORAP35398 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.69□□□□□ -1.66
RORAP35398 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.69□□□□□ -1.66
RORAP35398 NIFKP7-201ENST00000503365 834 ntBASIC4.69□□□□□ -1.66
RORAP35398 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC4.69□□□□□ -1.66
RORAP35398 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.69□□□□□ -1.66
RORAP35398 IGKV1-32-201ENST00000519290 311 ntBASIC4.69□□□□□ -1.66
RORAP35398 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.69□□□□□ -1.66
RORAP35398 BNIP3P1-201ENST00000547295 580 ntBASIC4.69□□□□□ -1.66
RORAP35398 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.69□□□□□ -1.66
RORAP35398 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.69□□□□□ -1.66
RORAP35398 AL161616.1-201ENST00000611867 286 ntBASIC4.69□□□□□ -1.66
RORAP35398 CR381572.2-201ENST00000624852 397 ntBASIC4.69□□□□□ -1.66
RORAP35398 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.69□□□□□ -1.66
RORAP35398 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RORAP35398 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RORAP35398 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
RORAP35398 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RORAP35398 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RORAP35398 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
RORAP35398 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RORAP35398 SAMMSON-226ENST00000642089 1582 ntBASIC4.69□□□□□ -1.66
RORAP35398 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
RORAP35398 DDX18P3-201ENST00000404856 2007 ntBASIC4.68□□□□□ -1.66
RORAP35398 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RORAP35398 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RORAP35398 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.68□□□□□ -1.66
RORAP35398 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
RORAP35398 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RORAP35398 SMG1P6-201ENST00000532337 2930 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms