Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC7.24□□□□□ -1.25
CLIP1P30622 RPL23AP43-201ENST00000446445 471 ntBASIC7.24□□□□□ -1.25
CLIP1P30622 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC7.24□□□□□ -1.25
CLIP1P30622 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CLIP1P30622 LSM3P2-201ENST00000551246 273 ntBASIC7.24□□□□□ -1.25
CLIP1P30622 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
CLIP1P30622 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
CLIP1P30622 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC7.23□□□□□ -1.25
CLIP1P30622 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CLIP1P30622 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CLIP1P30622 AL731566.1-201ENST00000620490 1937 ntBASIC7.23□□□□□ -1.25
CLIP1P30622 UBBP2-201ENST00000376781 231 ntBASIC7.23□□□□□ -1.25
CLIP1P30622 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC7.23□□□□□ -1.25
CLIP1P30622 AC087360.1-201ENST00000518788 616 ntBASIC7.23□□□□□ -1.25
CLIP1P30622 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC7.23□□□□□ -1.25
CLIP1P30622 AC021483.2-201ENST00000567415 758 ntBASIC7.23□□□□□ -1.25
CLIP1P30622 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC7.23□□□□□ -1.25
CLIP1P30622 SALL4P2-201ENST00000423288 2910 ntBASIC7.23□□□□□ -1.25
CLIP1P30622 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC7.22□□□□□ -1.25
CLIP1P30622 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CLIP1P30622 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CLIP1P30622 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
CLIP1P30622 AC008033.1-201ENST00000216407 1162 ntBASIC7.22□□□□□ -1.25
CLIP1P30622 RN7SKP263-201ENST00000411194 309 ntBASIC7.22□□□□□ -1.25
CLIP1P30622 BX119904.3-201ENST00000428194 957 ntBASIC7.22□□□□□ -1.25
CLIP1P30622 RPS26P4-201ENST00000431743 355 ntBASIC7.22□□□□□ -1.25
CLIP1P30622 NPM1P6-201ENST00000521088 871 ntBASIC7.22□□□□□ -1.25
CLIP1P30622 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC7.22□□□□□ -1.25
CLIP1P30622 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC7.22□□□□□ -1.25
CLIP1P30622 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC7.22□□□□□ -1.25
CLIP1P30622 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC7.22□□□□□ -1.25
CLIP1P30622 IMMP1LP1-201ENST00000605170 488 ntBASIC7.22□□□□□ -1.25
CLIP1P30622 AP005019.3-201ENST00000620418 560 ntBASIC7.22□□□□□ -1.25
CLIP1P30622 RALGAPA1P1-201ENST00000443361 6232 ntBASIC7.22□□□□□ -1.25
CLIP1P30622 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
CLIP1P30622 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
CLIP1P30622 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CLIP1P30622 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
CLIP1P30622 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
CLIP1P30622 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC7.21□□□□□ -1.25
CLIP1P30622 RNA5SP151-201ENST00000365632 117 ntBASIC7.21□□□□□ -1.25
CLIP1P30622 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
CLIP1P30622 AL139095.3-201ENST00000419672 1203 ntBASIC7.21□□□□□ -1.25
CLIP1P30622 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC7.21□□□□□ -1.25
CLIP1P30622 DHFRP3-201ENST00000455595 559 ntBASIC7.21□□□□□ -1.25
CLIP1P30622 RPL7AP52-201ENST00000458096 790 ntBASIC7.21□□□□□ -1.25
CLIP1P30622 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
CLIP1P30622 AC069304.1-201ENST00000491593 704 ntBASIC7.21□□□□□ -1.25
CLIP1P30622 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC7.21□□□□□ -1.25
CLIP1P30622 AC093824.1-201ENST00000508796 343 ntBASIC7.21□□□□□ -1.25
CLIP1P30622 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC7.21□□□□□ -1.25
CLIP1P30622 AL355852.1-201ENST00000454081 1771 ntBASIC7.21□□□□□ -1.26
CLIP1P30622 THAP12P5-201ENST00000405864 2275 ntBASIC7.21□□□□□ -1.26
CLIP1P30622 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
CLIP1P30622 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
CLIP1P30622 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
CLIP1P30622 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CLIP1P30622 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC7.2□□□□□ -1.26
CLIP1P30622 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC7.2□□□□□ -1.26
CLIP1P30622 AC007537.2-201ENST00000472093 511 ntBASIC7.2□□□□□ -1.26
CLIP1P30622 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC7.2□□□□□ -1.26
CLIP1P30622 AC026402.1-201ENST00000513642 170 ntBASIC7.2□□□□□ -1.26
CLIP1P30622 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CLIP1P30622 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC7.2□□□□□ -1.26
CLIP1P30622 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC7.2□□□□□ -1.26
CLIP1P30622 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC7.2□□□□□ -1.26
CLIP1P30622 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC7.2□□□□□ -1.26
CLIP1P30622 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC7.2□□□□□ -1.26
CLIP1P30622 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CLIP1P30622 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC7.2□□□□□ -1.26
CLIP1P30622 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CLIP1P30622 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC7.2□□□□□ -1.26
CLIP1P30622 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
CLIP1P30622 AC133552.1-201ENST00000569988 4007 ntBASIC7.2□□□□□ -1.26
CLIP1P30622 NRK-204ENST00000540278 1687 ntTSL 2 BASIC7.2□□□□□ -1.26
CLIP1P30622 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
CLIP1P30622 ST7-212ENST00000422922 1887 ntTSL 5 BASIC7.2□□□□□ -1.26
CLIP1P30622 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
CLIP1P30622 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CLIP1P30622 RNA5SP28-201ENST00000363841 119 ntBASIC7.19□□□□□ -1.26
CLIP1P30622 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC7.19□□□□□ -1.26
CLIP1P30622 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CLIP1P30622 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC7.19□□□□□ -1.26
CLIP1P30622 EIF4A2P4-201ENST00000458691 1196 ntBASIC7.19□□□□□ -1.26
CLIP1P30622 AC053481.1-201ENST00000467217 306 ntBASIC7.19□□□□□ -1.26
CLIP1P30622 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC7.19□□□□□ -1.26
CLIP1P30622 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC7.19□□□□□ -1.26
CLIP1P30622 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC7.19□□□□□ -1.26
CLIP1P30622 TRAV8-5-201ENST00000537369 341 ntBASIC7.19□□□□□ -1.26
CLIP1P30622 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CLIP1P30622 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC7.19□□□□□ -1.26
CLIP1P30622 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC7.19□□□□□ -1.26
CLIP1P30622 AC067959.1-201ENST00000604334 379 ntBASIC7.19□□□□□ -1.26
CLIP1P30622 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC7.19□□□□□ -1.26
CLIP1P30622 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
CLIP1P30622 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC7.19□□□□□ -1.26
CLIP1P30622 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC7.19□□□□□ -1.26
CLIP1P30622 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CLIP1P30622 STX3-208ENST00000641815 3236 ntBASIC7.19□□□□□ -1.26
CLIP1P30622 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms