Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 U3.23-201ENST00000391132 200 ntBASIC5.51□□□□□ -1.53
MMP3P08254 LRRC37BP1-201ENST00000398851 714 ntBASIC5.51□□□□□ -1.53
MMP3P08254 STAT4-203ENST00000409995 709 ntTSL 5 BASIC5.51□□□□□ -1.53
MMP3P08254 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.51□□□□□ -1.53
MMP3P08254 COX6CP17-201ENST00000421389 185 ntBASIC5.51□□□□□ -1.53
MMP3P08254 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC5.51□□□□□ -1.53
MMP3P08254 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC5.51□□□□□ -1.53
MMP3P08254 MTCO1P51-201ENST00000427672 1060 ntBASIC5.51□□□□□ -1.53
MMP3P08254 DNAJC19P7-201ENST00000428811 344 ntBASIC5.51□□□□□ -1.53
MMP3P08254 OR2B7P-201ENST00000429302 934 ntBASIC5.51□□□□□ -1.53
MMP3P08254 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.51□□□□□ -1.53
MMP3P08254 AC046176.1-201ENST00000435260 1170 ntBASIC5.51□□□□□ -1.53
MMP3P08254 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.51□□□□□ -1.53
MMP3P08254 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.51□□□□□ -1.53
MMP3P08254 AL450023.3-201ENST00000440592 271 ntBASIC5.51□□□□□ -1.53
MMP3P08254 GAPDHP14-201ENST00000450472 937 ntBASIC5.51□□□□□ -1.53
MMP3P08254 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.51□□□□□ -1.53
MMP3P08254 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC5.51□□□□□ -1.53
MMP3P08254 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.51□□□□□ -1.53
MMP3P08254 TVP23BP2-201ENST00000455082 615 ntBASIC5.51□□□□□ -1.53
MMP3P08254 AL672167.3-201ENST00000465951 960 ntBASIC5.51□□□□□ -1.53
MMP3P08254 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.51□□□□□ -1.53
MMP3P08254 OR9N1P-202ENST00000494289 481 ntBASIC5.51□□□□□ -1.53
MMP3P08254 TPT1P8-201ENST00000510120 555 ntBASIC5.51□□□□□ -1.53
MMP3P08254 RNU6-334P-201ENST00000517072 102 ntBASIC5.51□□□□□ -1.53
MMP3P08254 SNORA76.2-201ENST00000517095 137 ntBASIC5.51□□□□□ -1.53
MMP3P08254 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.51□□□□□ -1.53
MMP3P08254 NOP56P3-201ENST00000549457 385 ntBASIC5.51□□□□□ -1.53
MMP3P08254 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.51□□□□□ -1.53
MMP3P08254 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.51□□□□□ -1.53
MMP3P08254 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.51□□□□□ -1.53
MMP3P08254 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.51□□□□□ -1.53
MMP3P08254 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.51□□□□□ -1.53
MMP3P08254 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.51□□□□□ -1.53
MMP3P08254 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.51□□□□□ -1.53
MMP3P08254 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.51□□□□□ -1.53
MMP3P08254 MTATP6P2-201ENST00000603319 678 ntBASIC5.51□□□□□ -1.53
MMP3P08254 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.51□□□□□ -1.53
MMP3P08254 AC017076.1-201ENST00000607613 578 ntBASIC5.51□□□□□ -1.53
MMP3P08254 AC097504.2-201ENST00000608088 454 ntBASIC5.51□□□□□ -1.53
MMP3P08254 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC5.51□□□□□ -1.53
MMP3P08254 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.51□□□□□ -1.53
MMP3P08254 AC019206.1-201ENST00000621938 425 ntBASIC5.51□□□□□ -1.53
MMP3P08254 AL138955.1-201ENST00000622881 1040 ntBASIC5.51□□□□□ -1.53
MMP3P08254 CR381572.2-201ENST00000624852 397 ntBASIC5.51□□□□□ -1.53
MMP3P08254 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC5.51□□□□□ -1.53
MMP3P08254 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
MMP3P08254 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.51□□□□□ -1.53
MMP3P08254 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
MMP3P08254 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
MMP3P08254 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.51□□□□□ -1.53
MMP3P08254 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
MMP3P08254 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
MMP3P08254 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
MMP3P08254 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
MMP3P08254 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
MMP3P08254 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
MMP3P08254 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
MMP3P08254 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.5□□□□□ -1.53
MMP3P08254 AC010928.1-201ENST00000592477 1447 ntBASIC5.5□□□□□ -1.53
MMP3P08254 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
MMP3P08254 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
MMP3P08254 RNA5SP332-201ENST00000391063 115 ntBASIC5.5□□□□□ -1.53
MMP3P08254 MIR298-201ENST00000401212 88 ntBASIC5.5□□□□□ -1.53
MMP3P08254 ATP5F1P6-201ENST00000402768 767 ntBASIC5.5□□□□□ -1.53
MMP3P08254 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC5.5□□□□□ -1.53
MMP3P08254 AC016712.1-201ENST00000431088 378 ntBASIC5.5□□□□□ -1.53
MMP3P08254 MTND2P40-201ENST00000436718 841 ntBASIC5.5□□□□□ -1.53
MMP3P08254 AC005154.2-201ENST00000438110 379 ntBASIC5.5□□□□□ -1.53
MMP3P08254 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.5□□□□□ -1.53
MMP3P08254 AL691482.1-201ENST00000453255 87 ntBASIC5.5□□□□□ -1.53
MMP3P08254 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.5□□□□□ -1.53
MMP3P08254 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.5□□□□□ -1.53
MMP3P08254 AC104629.2-201ENST00000468627 598 ntBASIC5.5□□□□□ -1.53
MMP3P08254 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.5□□□□□ -1.53
MMP3P08254 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.5□□□□□ -1.53
MMP3P08254 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.5□□□□□ -1.53
MMP3P08254 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
MMP3P08254 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.5□□□□□ -1.53
MMP3P08254 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.5□□□□□ -1.53
MMP3P08254 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC5.5□□□□□ -1.53
MMP3P08254 RN7SL690P-201ENST00000582087 240 ntBASIC5.5□□□□□ -1.53
MMP3P08254 MIR4420-201ENST00000583944 77 ntBASIC5.5□□□□□ -1.53
MMP3P08254 AC133794.1-201ENST00000602731 914 ntBASIC5.5□□□□□ -1.53
MMP3P08254 AC012414.7-202ENST00000622705 1090 ntBASIC5.5□□□□□ -1.53
MMP3P08254 AL356118.1-201ENST00000635272 1078 ntBASIC5.5□□□□□ -1.53
MMP3P08254 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC5.5□□□□□ -1.53
MMP3P08254 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
MMP3P08254 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
MMP3P08254 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC5.5□□□□□ -1.53
MMP3P08254 Z95114.1-201ENST00000624264 14574 ntBASIC5.5□□□□□ -1.53
MMP3P08254 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
MMP3P08254 AC083843.2-201ENST00000568248 6253 ntBASIC5.5□□□□□ -1.53
MMP3P08254 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
MMP3P08254 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.5□□□□□ -1.53
MMP3P08254 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
MMP3P08254 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
MMP3P08254 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
MMP3P08254 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
MMP3P08254 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms