Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC6.19□□□□□ -1.42
COL3A1P02461 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC6.19□□□□□ -1.42
COL3A1P02461 RPL17P35-201ENST00000432217 549 ntBASIC6.19□□□□□ -1.42
COL3A1P02461 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL3A1P02461 NIP7P2-201ENST00000485801 544 ntBASIC6.19□□□□□ -1.42
COL3A1P02461 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC6.19□□□□□ -1.42
COL3A1P02461 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL3A1P02461 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC6.19□□□□□ -1.42
COL3A1P02461 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC6.19□□□□□ -1.42
COL3A1P02461 MTCYBP27-201ENST00000555160 670 ntBASIC6.19□□□□□ -1.42
COL3A1P02461 AC105036.1-201ENST00000566222 271 ntBASIC6.19□□□□□ -1.42
COL3A1P02461 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC6.19□□□□□ -1.42
COL3A1P02461 KATNBL1P1-201ENST00000605192 748 ntBASIC6.19□□□□□ -1.42
COL3A1P02461 AC006946.3-201ENST00000609791 756 ntBASIC6.19□□□□□ -1.42
COL3A1P02461 AC100847.1-201ENST00000611316 481 ntBASIC6.19□□□□□ -1.42
COL3A1P02461 AC010435.1-201ENST00000623353 1177 ntBASIC6.19□□□□□ -1.42
COL3A1P02461 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL3A1P02461 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL3A1P02461 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.19□□□□□ -1.42
COL3A1P02461 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL3A1P02461 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL3A1P02461 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL3A1P02461 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL3A1P02461 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL3A1P02461 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL3A1P02461 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL3A1P02461 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL3A1P02461 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL3A1P02461 ZNF92P1Y-201ENST00000415010 1191 ntBASIC6.18□□□□□ -1.42
COL3A1P02461 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC6.18□□□□□ -1.42
COL3A1P02461 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC6.18□□□□□ -1.42
COL3A1P02461 TPTE2P3-201ENST00000441562 1189 ntBASIC6.18□□□□□ -1.42
COL3A1P02461 H2AFZP5-201ENST00000446960 382 ntBASIC6.18□□□□□ -1.42
COL3A1P02461 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL3A1P02461 NDUFAF4P3-201ENST00000456468 525 ntBASIC6.18□□□□□ -1.42
COL3A1P02461 RN7SL205P-201ENST00000490174 284 ntBASIC6.18□□□□□ -1.42
COL3A1P02461 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC6.18□□□□□ -1.42
COL3A1P02461 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC6.18□□□□□ -1.42
COL3A1P02461 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC6.18□□□□□ -1.42
COL3A1P02461 AC135279.1-201ENST00000543493 504 ntBASIC6.18□□□□□ -1.42
COL3A1P02461 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC6.18□□□□□ -1.42
COL3A1P02461 AC087477.6-201ENST00000559595 843 ntBASIC6.18□□□□□ -1.42
COL3A1P02461 AC007066.2-202ENST00000566531 914 ntBASIC6.18□□□□□ -1.42
COL3A1P02461 MIR4715-201ENST00000584117 79 ntBASIC6.18□□□□□ -1.42
COL3A1P02461 RN7SL52P-201ENST00000584271 284 ntBASIC6.18□□□□□ -1.42
COL3A1P02461 AC040174.2-201ENST00000602701 465 ntBASIC6.18□□□□□ -1.42
COL3A1P02461 BNIP3P19-201ENST00000605397 577 ntBASIC6.18□□□□□ -1.42
COL3A1P02461 AC084824.5-201ENST00000612009 413 ntBASIC6.18□□□□□ -1.42
COL3A1P02461 RN7SL722P-201ENST00000617780 284 ntBASIC6.18□□□□□ -1.42
COL3A1P02461 RN7SL565P-201ENST00000618246 284 ntBASIC6.18□□□□□ -1.42
COL3A1P02461 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC6.18□□□□□ -1.42
COL3A1P02461 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC6.18□□□□□ -1.42
COL3A1P02461 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
COL3A1P02461 OR51H2P-202ENST00000641424 3046 ntBASIC6.18□□□□□ -1.42
COL3A1P02461 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
COL3A1P02461 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC6.18□□□□□ -1.42
COL3A1P02461 ZNF137P-201ENST00000456718 1920 ntBASIC6.18□□□□□ -1.42
COL3A1P02461 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC6.18□□□□□ -1.42
COL3A1P02461 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL3A1P02461 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL3A1P02461 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL3A1P02461 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
COL3A1P02461 SSR1P2-201ENST00000415208 787 ntBASIC6.17□□□□□ -1.42
COL3A1P02461 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC6.17□□□□□ -1.42
COL3A1P02461 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC6.17□□□□□ -1.42
COL3A1P02461 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC6.17□□□□□ -1.42
COL3A1P02461 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC6.17□□□□□ -1.42
COL3A1P02461 AL445669.2-201ENST00000454425 421 ntBASIC6.17□□□□□ -1.42
COL3A1P02461 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL3A1P02461 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.17□□□□□ -1.42
COL3A1P02461 MAL2-201ENST00000522112 573 ntTSL 4 BASIC6.17□□□□□ -1.42
COL3A1P02461 AP003102.1-201ENST00000525638 661 ntBASIC6.17□□□□□ -1.42
COL3A1P02461 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL3A1P02461 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC6.17□□□□□ -1.42
COL3A1P02461 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC6.17□□□□□ -1.42
COL3A1P02461 AC130352.1-201ENST00000602979 661 ntBASIC6.17□□□□□ -1.42
COL3A1P02461 AC019193.2-201ENST00000610012 634 ntBASIC6.17□□□□□ -1.42
COL3A1P02461 AC093783.1-201ENST00000612976 329 ntBASIC6.17□□□□□ -1.42
COL3A1P02461 AC005899.7-201ENST00000618199 588 ntBASIC6.17□□□□□ -1.42
COL3A1P02461 AC009120.7-201ENST00000623452 780 ntBASIC6.17□□□□□ -1.42
COL3A1P02461 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL3A1P02461 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL3A1P02461 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
COL3A1P02461 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL3A1P02461 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
COL3A1P02461 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.17□□□□□ -1.42
COL3A1P02461 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.17□□□□□ -1.42
COL3A1P02461 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL3A1P02461 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC6.16□□□□□ -1.42
COL3A1P02461 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL3A1P02461 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL3A1P02461 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC6.16□□□□□ -1.42
COL3A1P02461 UQCRBP1-201ENST00000421129 336 ntBASIC6.16□□□□□ -1.42
COL3A1P02461 AC106901.1-201ENST00000425086 698 ntBASIC6.16□□□□□ -1.42
COL3A1P02461 RPL21P43-201ENST00000425440 472 ntBASIC6.16□□□□□ -1.42
COL3A1P02461 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC6.16□□□□□ -1.42
COL3A1P02461 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC6.16□□□□□ -1.42
COL3A1P02461 AC090602.1-201ENST00000469695 252 ntBASIC6.16□□□□□ -1.42
COL3A1P02461 AC104763.1-201ENST00000475274 360 ntBASIC6.16□□□□□ -1.42
COL3A1P02461 AC025181.1-201ENST00000477507 416 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms