Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.74□□□□□ -1.65
SHOX2O60902 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.74□□□□□ -1.65
SHOX2O60902 SUGT1P3-202ENST00000604259 383 ntBASIC4.74□□□□□ -1.65
SHOX2O60902 AC010201.1-201ENST00000605051 540 ntBASIC4.74□□□□□ -1.65
SHOX2O60902 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.74□□□□□ -1.65
SHOX2O60902 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.74□□□□□ -1.65
SHOX2O60902 AL022401.1-201ENST00000619498 108 ntBASIC4.74□□□□□ -1.65
SHOX2O60902 AC074140.1-201ENST00000621617 208 ntBASIC4.74□□□□□ -1.65
SHOX2O60902 AC074101.1-201ENST00000637861 241 ntBASIC4.74□□□□□ -1.65
SHOX2O60902 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SHOX2O60902 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHOX2O60902 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHOX2O60902 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.74□□□□□ -1.65
SHOX2O60902 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SHOX2O60902 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.74□□□□□ -1.65
SHOX2O60902 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SHOX2O60902 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SHOX2O60902 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SHOX2O60902 AC092111.2-201ENST00000611627 1414 ntBASIC4.73□□□□□ -1.65
SHOX2O60902 AL031119.1-201ENST00000404707 1879 ntBASIC4.73□□□□□ -1.65
SHOX2O60902 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.73□□□□□ -1.65
SHOX2O60902 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.73□□□□□ -1.65
SHOX2O60902 KARSP3-201ENST00000571212 1504 ntBASIC4.73□□□□□ -1.65
SHOX2O60902 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SHOX2O60902 RNA5SP242-201ENST00000364171 118 ntBASIC4.73□□□□□ -1.65
SHOX2O60902 AL133270.1-201ENST00000402635 279 ntBASIC4.73□□□□□ -1.65
SHOX2O60902 RPL37P18-201ENST00000411602 243 ntBASIC4.73□□□□□ -1.65
SHOX2O60902 AC013268.2-201ENST00000420753 337 ntBASIC4.73□□□□□ -1.65
SHOX2O60902 AL133325.1-201ENST00000421090 382 ntBASIC4.73□□□□□ -1.65
SHOX2O60902 FAM96AP1-201ENST00000430879 482 ntBASIC4.73□□□□□ -1.65
SHOX2O60902 ELOCP18-201ENST00000434209 337 ntBASIC4.73□□□□□ -1.65
SHOX2O60902 CYCSP12-201ENST00000437729 300 ntBASIC4.73□□□□□ -1.65
SHOX2O60902 ELOCP8-201ENST00000439309 332 ntBASIC4.73□□□□□ -1.65
SHOX2O60902 ELOCP15-201ENST00000442090 332 ntBASIC4.73□□□□□ -1.65
SHOX2O60902 RPS26P41-201ENST00000450370 284 ntBASIC4.73□□□□□ -1.65
SHOX2O60902 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.73□□□□□ -1.65
SHOX2O60902 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.73□□□□□ -1.65
SHOX2O60902 RPS4XP20-201ENST00000505751 772 ntBASIC4.73□□□□□ -1.65
SHOX2O60902 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.73□□□□□ -1.65
SHOX2O60902 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.73□□□□□ -1.65
SHOX2O60902 RN7SKP5-201ENST00000517045 272 ntBASIC4.73□□□□□ -1.65
SHOX2O60902 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SHOX2O60902 MIR4489-201ENST00000578869 62 ntBASIC4.73□□□□□ -1.65
SHOX2O60902 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.73□□□□□ -1.65
SHOX2O60902 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.73□□□□□ -1.65
SHOX2O60902 AC133552.5-201ENST00000604266 540 ntBASIC4.73□□□□□ -1.65
SHOX2O60902 AC104695.2-201ENST00000605056 775 ntBASIC4.73□□□□□ -1.65
SHOX2O60902 AP002360.3-201ENST00000607673 710 ntBASIC4.73□□□□□ -1.65
SHOX2O60902 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.73□□□□□ -1.65
SHOX2O60902 AC005840.5-201ENST00000619166 599 ntBASIC4.73□□□□□ -1.65
SHOX2O60902 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.73□□□□□ -1.65
SHOX2O60902 AL356121.2-201ENST00000624715 780 ntBASIC4.73□□□□□ -1.65
SHOX2O60902 CASC19-222ENST00000641321 1173 ntBASIC4.73□□□□□ -1.65
SHOX2O60902 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.73□□□□□ -1.65
SHOX2O60902 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
SHOX2O60902 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SHOX2O60902 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SHOX2O60902 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SHOX2O60902 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.73□□□□□ -1.65
SHOX2O60902 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
SHOX2O60902 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SHOX2O60902 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHOX2O60902 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SHOX2O60902 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHOX2O60902 NOL8P1-201ENST00000508336 3529 ntBASIC4.72□□□□□ -1.65
SHOX2O60902 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHOX2O60902 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SHOX2O60902 AL391361.1-201ENST00000405580 489 ntBASIC4.72□□□□□ -1.65
SHOX2O60902 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.72□□□□□ -1.65
SHOX2O60902 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.72□□□□□ -1.65
SHOX2O60902 RPA2P2-201ENST00000419698 796 ntBASIC4.72□□□□□ -1.65
SHOX2O60902 ARAFP2-201ENST00000440565 559 ntBASIC4.72□□□□□ -1.65
SHOX2O60902 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.72□□□□□ -1.65
SHOX2O60902 RPL7P45-201ENST00000455851 743 ntBASIC4.72□□□□□ -1.65
SHOX2O60902 AC023141.9-201ENST00000458734 412 ntBASIC4.72□□□□□ -1.65
SHOX2O60902 EIF1P7-201ENST00000487533 337 ntBASIC4.72□□□□□ -1.65
SHOX2O60902 PARP4P3-201ENST00000510265 317 ntBASIC4.72□□□□□ -1.65
SHOX2O60902 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHOX2O60902 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.72□□□□□ -1.65
SHOX2O60902 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.72□□□□□ -1.65
SHOX2O60902 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.72□□□□□ -1.65
SHOX2O60902 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SHOX2O60902 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.72□□□□□ -1.65
SHOX2O60902 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC4.72□□□□□ -1.65
SHOX2O60902 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.72□□□□□ -1.65
SHOX2O60902 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.72□□□□□ -1.65
SHOX2O60902 AC091178.1-203ENST00000584586 279 ntBASIC4.72□□□□□ -1.65
SHOX2O60902 EIF1P5-201ENST00000585002 234 ntBASIC4.72□□□□□ -1.65
SHOX2O60902 SUMO2P15-201ENST00000604285 278 ntBASIC4.72□□□□□ -1.65
SHOX2O60902 AC008966.2-201ENST00000606157 453 ntBASIC4.72□□□□□ -1.65
SHOX2O60902 AC010424.2-201ENST00000607594 443 ntBASIC4.72□□□□□ -1.65
SHOX2O60902 AL359513.1-201ENST00000614364 557 ntBASIC4.72□□□□□ -1.65
SHOX2O60902 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.72□□□□□ -1.65
SHOX2O60902 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SHOX2O60902 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.72□□□□□ -1.65
SHOX2O60902 AL691477.1-201ENST00000624398 162 ntBASIC4.72□□□□□ -1.65
SHOX2O60902 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHOX2O60902 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.72□□□□□ -1.65
SHOX2O60902 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHOX2O60902 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms