Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 MIR16-2-201ENST00000362117 81 ntBASIC4.61□□□□□ -1.67
LMX1BO60663 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LMX1BO60663 RNU6-298P-201ENST00000390888 96 ntBASIC4.61□□□□□ -1.67
LMX1BO60663 AL390774.1-201ENST00000411924 246 ntBASIC4.61□□□□□ -1.67
LMX1BO60663 COX5BP7-201ENST00000414780 274 ntBASIC4.61□□□□□ -1.67
LMX1BO60663 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.61□□□□□ -1.67
LMX1BO60663 RBMY2KP-201ENST00000418221 992 ntBASIC4.61□□□□□ -1.67
LMX1BO60663 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.61□□□□□ -1.67
LMX1BO60663 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.61□□□□□ -1.67
LMX1BO60663 AC005005.2-201ENST00000420779 380 ntBASIC4.61□□□□□ -1.67
LMX1BO60663 AC241520.1-201ENST00000422654 1099 ntBASIC4.61□□□□□ -1.67
LMX1BO60663 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LMX1BO60663 AC092648.1-201ENST00000425870 423 ntBASIC4.61□□□□□ -1.67
LMX1BO60663 AC124944.2-201ENST00000429866 1242 ntBASIC4.61□□□□□ -1.67
LMX1BO60663 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.61□□□□□ -1.67
LMX1BO60663 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC4.61□□□□□ -1.67
LMX1BO60663 AC245047.2-201ENST00000441060 530 ntBASIC4.61□□□□□ -1.67
LMX1BO60663 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.61□□□□□ -1.67
LMX1BO60663 AC245517.2-201ENST00000442890 346 ntBASIC4.61□□□□□ -1.67
LMX1BO60663 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.61□□□□□ -1.67
LMX1BO60663 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.61□□□□□ -1.67
LMX1BO60663 SETP6-201ENST00000479329 568 ntBASIC4.61□□□□□ -1.67
LMX1BO60663 RN7SL814P-201ENST00000487715 300 ntBASIC4.61□□□□□ -1.67
LMX1BO60663 AC082651.2-201ENST00000496833 166 ntBASIC4.61□□□□□ -1.67
LMX1BO60663 GOLGA5P1-201ENST00000507317 980 ntBASIC4.61□□□□□ -1.67
LMX1BO60663 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.61□□□□□ -1.67
LMX1BO60663 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.61□□□□□ -1.67
LMX1BO60663 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.61□□□□□ -1.67
LMX1BO60663 MTATP6P15-201ENST00000527233 835 ntBASIC4.61□□□□□ -1.67
LMX1BO60663 AP000676.2-201ENST00000529711 301 ntBASIC4.61□□□□□ -1.67
LMX1BO60663 HIGD1AP5-201ENST00000529959 259 ntBASIC4.61□□□□□ -1.67
LMX1BO60663 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.61□□□□□ -1.67
LMX1BO60663 OR5D15P-201ENST00000531671 942 ntBASIC4.61□□□□□ -1.67
LMX1BO60663 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
LMX1BO60663 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.61□□□□□ -1.67
LMX1BO60663 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
LMX1BO60663 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.61□□□□□ -1.67
LMX1BO60663 AC040958.1-201ENST00000561102 201 ntBASIC4.61□□□□□ -1.67
LMX1BO60663 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.61□□□□□ -1.67
LMX1BO60663 MIR3691-201ENST00000578066 90 ntBASIC4.61□□□□□ -1.67
LMX1BO60663 AC022884.2-201ENST00000578535 580 ntBASIC4.61□□□□□ -1.67
LMX1BO60663 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC4.61□□□□□ -1.67
LMX1BO60663 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.61□□□□□ -1.67
LMX1BO60663 MTCO3P22-201ENST00000603219 784 ntBASIC4.61□□□□□ -1.67
LMX1BO60663 AL365400.2-201ENST00000605604 902 ntBASIC4.61□□□□□ -1.67
LMX1BO60663 AC021851.1-201ENST00000608537 1082 ntBASIC4.61□□□□□ -1.67
LMX1BO60663 AC000068.2-201ENST00000608816 460 ntBASIC4.61□□□□□ -1.67
LMX1BO60663 AL096803.3-201ENST00000609032 532 ntBASIC4.61□□□□□ -1.67
LMX1BO60663 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.61□□□□□ -1.67
LMX1BO60663 AC017104.5-201ENST00000637647 639 ntBASIC4.61□□□□□ -1.67
LMX1BO60663 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.61□□□□□ -1.67
LMX1BO60663 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
LMX1BO60663 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
LMX1BO60663 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LMX1BO60663 TRIM51GP-201ENST00000534741 1350 ntBASIC4.61□□□□□ -1.67
LMX1BO60663 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.61□□□□□ -1.67
LMX1BO60663 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LMX1BO60663 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LMX1BO60663 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LMX1BO60663 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LMX1BO60663 AC068870.3-201ENST00000625077 2536 ntBASIC4.61□□□□□ -1.67
LMX1BO60663 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LMX1BO60663 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LMX1BO60663 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LMX1BO60663 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.6□□□□□ -1.67
LMX1BO60663 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LMX1BO60663 SMG1P7-201ENST00000565246 2704 ntBASIC4.6□□□□□ -1.67
LMX1BO60663 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
LMX1BO60663 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
LMX1BO60663 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.6□□□□□ -1.67
LMX1BO60663 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
LMX1BO60663 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LMX1BO60663 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LMX1BO60663 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.6□□□□□ -1.67
LMX1BO60663 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LMX1BO60663 RPL21P67-201ENST00000402896 478 ntBASIC4.6□□□□□ -1.67
LMX1BO60663 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.6□□□□□ -1.67
LMX1BO60663 RN7SKP16-201ENST00000410180 299 ntBASIC4.6□□□□□ -1.67
LMX1BO60663 OR51B3P-201ENST00000412287 913 ntBASIC4.6□□□□□ -1.67
LMX1BO60663 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.6□□□□□ -1.67
LMX1BO60663 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.6□□□□□ -1.67
LMX1BO60663 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.6□□□□□ -1.67
LMX1BO60663 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.6□□□□□ -1.67
LMX1BO60663 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.6□□□□□ -1.67
LMX1BO60663 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.6□□□□□ -1.67
LMX1BO60663 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC4.6□□□□□ -1.67
LMX1BO60663 MTCO1P51-201ENST00000427672 1060 ntBASIC4.6□□□□□ -1.67
LMX1BO60663 FAM96AP1-201ENST00000430879 482 ntBASIC4.6□□□□□ -1.67
LMX1BO60663 AL606490.7-201ENST00000433136 191 ntBASIC4.6□□□□□ -1.67
LMX1BO60663 AC092447.2-201ENST00000435487 669 ntBASIC4.6□□□□□ -1.67
LMX1BO60663 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.6□□□□□ -1.67
LMX1BO60663 H2AFZP6-201ENST00000444403 394 ntBASIC4.6□□□□□ -1.67
LMX1BO60663 Z83846.1-201ENST00000446798 265 ntBASIC4.6□□□□□ -1.67
LMX1BO60663 AL161722.1-201ENST00000446972 1032 ntBASIC4.6□□□□□ -1.67
LMX1BO60663 RPL7P61-201ENST00000451721 751 ntBASIC4.6□□□□□ -1.67
LMX1BO60663 AC104634.1-201ENST00000452720 462 ntBASIC4.6□□□□□ -1.67
LMX1BO60663 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.6□□□□□ -1.67
LMX1BO60663 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.6□□□□□ -1.67
LMX1BO60663 SNORD11.1-201ENST00000459482 85 ntBASIC4.6□□□□□ -1.67
LMX1BO60663 AC016687.1-201ENST00000482574 353 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms