Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.7□□□□□ -1.66
PRKNO60260 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.7□□□□□ -1.66
PRKNO60260 RN7SL97P-201ENST00000486780 299 ntBASIC4.7□□□□□ -1.66
PRKNO60260 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
PRKNO60260 AC118282.1-201ENST00000506408 765 ntBASIC4.7□□□□□ -1.66
PRKNO60260 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC4.7□□□□□ -1.66
PRKNO60260 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.7□□□□□ -1.66
PRKNO60260 RNA5SP43-201ENST00000516559 110 ntBASIC4.7□□□□□ -1.66
PRKNO60260 RN7SKP260-201ENST00000516907 149 ntBASIC4.7□□□□□ -1.66
PRKNO60260 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.7□□□□□ -1.66
PRKNO60260 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC4.7□□□□□ -1.66
PRKNO60260 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.7□□□□□ -1.66
PRKNO60260 OR7E128P-201ENST00000532736 1024 ntBASIC4.7□□□□□ -1.66
PRKNO60260 AP001804.2-201ENST00000533932 910 ntBASIC4.7□□□□□ -1.66
PRKNO60260 AL512310.9-201ENST00000553311 948 ntBASIC4.7□□□□□ -1.66
PRKNO60260 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.7□□□□□ -1.66
PRKNO60260 AC025918.2-201ENST00000558683 763 ntBASIC4.7□□□□□ -1.66
PRKNO60260 MIR4646-201ENST00000580775 63 ntBASIC4.7□□□□□ -1.66
PRKNO60260 MIR4436B2-201ENST00000581415 91 ntBASIC4.7□□□□□ -1.66
PRKNO60260 MIR4436B1-201ENST00000583272 91 ntBASIC4.7□□□□□ -1.66
PRKNO60260 AP002884.5-201ENST00000595053 1132 ntBASIC4.7□□□□□ -1.66
PRKNO60260 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.7□□□□□ -1.66
PRKNO60260 AC108359.1-201ENST00000616451 1211 ntBASIC4.7□□□□□ -1.66
PRKNO60260 AC091932.2-201ENST00000623014 291 ntBASIC4.7□□□□□ -1.66
PRKNO60260 AC073342.3-201ENST00000624211 193 ntBASIC4.7□□□□□ -1.66
PRKNO60260 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.7□□□□□ -1.66
PRKNO60260 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.7□□□□□ -1.66
PRKNO60260 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PRKNO60260 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.7□□□□□ -1.66
PRKNO60260 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
PRKNO60260 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PRKNO60260 ADAM5-202ENST00000399789 1942 ntBASIC4.7□□□□□ -1.66
PRKNO60260 AL645568.2-201ENST00000432815 1337 ntBASIC4.7□□□□□ -1.66
PRKNO60260 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PRKNO60260 AC131971.1-201ENST00000332881 1482 ntBASIC4.69□□□□□ -1.66
PRKNO60260 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
PRKNO60260 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PRKNO60260 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.69□□□□□ -1.66
PRKNO60260 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PRKNO60260 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PRKNO60260 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.69□□□□□ -1.66
PRKNO60260 OR13C3-201ENST00000374781 1108 ntBASIC4.69□□□□□ -1.66
PRKNO60260 RNU6-1257P-201ENST00000384625 110 ntBASIC4.69□□□□□ -1.66
PRKNO60260 TAF9BP2-201ENST00000400856 499 ntBASIC4.69□□□□□ -1.66
PRKNO60260 AL645733.1-201ENST00000402250 217 ntBASIC4.69□□□□□ -1.66
PRKNO60260 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.69□□□□□ -1.66
PRKNO60260 RNU6-584P-201ENST00000410350 95 ntBASIC4.69□□□□□ -1.66
PRKNO60260 RN7SKP125-201ENST00000410481 302 ntBASIC4.69□□□□□ -1.66
PRKNO60260 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.69□□□□□ -1.66
PRKNO60260 AC234781.4-201ENST00000419384 244 ntBASIC4.69□□□□□ -1.66
PRKNO60260 AC013262.1-201ENST00000426710 252 ntBASIC4.69□□□□□ -1.66
PRKNO60260 AC114973.1-201ENST00000429057 632 ntBASIC4.69□□□□□ -1.66
PRKNO60260 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.69□□□□□ -1.66
PRKNO60260 FTLP19-201ENST00000433300 394 ntBASIC4.69□□□□□ -1.66
PRKNO60260 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.69□□□□□ -1.66
PRKNO60260 Z80107.1-201ENST00000436830 412 ntBASIC4.69□□□□□ -1.66
PRKNO60260 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.69□□□□□ -1.66
PRKNO60260 RPL7AP61-201ENST00000443410 636 ntBASIC4.69□□□□□ -1.66
PRKNO60260 TRY2P-201ENST00000448860 689 ntBASIC4.69□□□□□ -1.66
PRKNO60260 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.69□□□□□ -1.66
PRKNO60260 RPL7P55-201ENST00000450522 746 ntBASIC4.69□□□□□ -1.66
PRKNO60260 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.69□□□□□ -1.66
PRKNO60260 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.69□□□□□ -1.66
PRKNO60260 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.69□□□□□ -1.66
PRKNO60260 MRPS33P2-201ENST00000507850 322 ntBASIC4.69□□□□□ -1.66
PRKNO60260 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.69□□□□□ -1.66
PRKNO60260 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.69□□□□□ -1.66
PRKNO60260 AC021146.7-201ENST00000509604 775 ntBASIC4.69□□□□□ -1.66
PRKNO60260 COX6B1P5-201ENST00000509843 249 ntBASIC4.69□□□□□ -1.66
PRKNO60260 AC016559.2-201ENST00000510759 359 ntBASIC4.69□□□□□ -1.66
PRKNO60260 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.69□□□□□ -1.66
PRKNO60260 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC4.69□□□□□ -1.66
PRKNO60260 AC100784.1-201ENST00000522790 310 ntBASIC4.69□□□□□ -1.66
PRKNO60260 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.69□□□□□ -1.66
PRKNO60260 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.69□□□□□ -1.66
PRKNO60260 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.69□□□□□ -1.66
PRKNO60260 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.69□□□□□ -1.66
PRKNO60260 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
PRKNO60260 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC4.69□□□□□ -1.66
PRKNO60260 AF230666.2-201ENST00000602328 725 ntBASIC4.69□□□□□ -1.66
PRKNO60260 AC091057.3-201ENST00000602684 733 ntBASIC4.69□□□□□ -1.66
PRKNO60260 AC023762.1-201ENST00000603280 584 ntBASIC4.69□□□□□ -1.66
PRKNO60260 AC119501.1-201ENST00000603646 475 ntBASIC4.69□□□□□ -1.66
PRKNO60260 MEMO1P5-201ENST00000604810 406 ntBASIC4.69□□□□□ -1.66
PRKNO60260 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.69□□□□□ -1.66
PRKNO60260 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.69□□□□□ -1.66
PRKNO60260 AC105105.5-201ENST00000622635 1294 ntBASIC4.69□□□□□ -1.66
PRKNO60260 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.69□□□□□ -1.66
PRKNO60260 AC008993.2-201ENST00000631744 806 ntBASIC4.69□□□□□ -1.66
PRKNO60260 AC006927.4-201ENST00000639187 543 ntBASIC4.69□□□□□ -1.66
PRKNO60260 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PRKNO60260 IRF5P1-201ENST00000504852 2164 ntBASIC4.69□□□□□ -1.66
PRKNO60260 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.69□□□□□ -1.66
PRKNO60260 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PRKNO60260 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PRKNO60260 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PRKNO60260 AL031595.2-201ENST00000624215 19071 ntBASIC4.69□□□□□ -1.66
PRKNO60260 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PRKNO60260 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC4.69□□□□□ -1.66
PRKNO60260 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms