Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
PROM1O43490 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PROM1O43490 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PROM1O43490 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
PROM1O43490 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.46□□□□□ -1.54
PROM1O43490 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.46□□□□□ -1.54
PROM1O43490 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
PROM1O43490 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.46□□□□□ -1.54
PROM1O43490 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
PROM1O43490 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.46□□□□□ -1.54
PROM1O43490 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PROM1O43490 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PROM1O43490 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PROM1O43490 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PROM1O43490 DDX18P5-201ENST00000534547 1306 ntBASIC5.46□□□□□ -1.54
PROM1O43490 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PROM1O43490 AC093849.1-201ENST00000563631 2209 ntBASIC5.46□□□□□ -1.54
PROM1O43490 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
PROM1O43490 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.45□□□□□ -1.54
PROM1O43490 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
PROM1O43490 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.45□□□□□ -1.54
PROM1O43490 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PROM1O43490 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.45□□□□□ -1.54
PROM1O43490 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.45□□□□□ -1.54
PROM1O43490 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.45□□□□□ -1.54
PROM1O43490 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.45□□□□□ -1.54
PROM1O43490 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PROM1O43490 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.45□□□□□ -1.54
PROM1O43490 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
PROM1O43490 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
PROM1O43490 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PROM1O43490 RNU1-146P-201ENST00000364015 165 ntBASIC5.45□□□□□ -1.54
PROM1O43490 RNA5SP242-201ENST00000364171 118 ntBASIC5.45□□□□□ -1.54
PROM1O43490 RNU4-51P-201ENST00000364206 140 ntBASIC5.45□□□□□ -1.54
PROM1O43490 U3.10-201ENST00000364459 214 ntBASIC5.45□□□□□ -1.54
PROM1O43490 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.45□□□□□ -1.54
PROM1O43490 SNORD116-9-201ENST00000384000 95 ntBASIC5.45□□□□□ -1.54
PROM1O43490 SNORD116-3-201ENST00000384287 95 ntBASIC5.45□□□□□ -1.54
PROM1O43490 SNORD116-7-201ENST00000384404 95 ntBASIC5.45□□□□□ -1.54
PROM1O43490 SNORD116-5-201ENST00000384462 95 ntBASIC5.45□□□□□ -1.54
PROM1O43490 RNU6-932P-201ENST00000391108 106 ntBASIC5.45□□□□□ -1.54
PROM1O43490 AL357752.1-201ENST00000412817 349 ntBASIC5.45□□□□□ -1.54
PROM1O43490 METTL15P3-201ENST00000415522 1221 ntBASIC5.45□□□□□ -1.54
PROM1O43490 AL031779.1-201ENST00000415663 330 ntBASIC5.45□□□□□ -1.54
PROM1O43490 RPS26P13-201ENST00000419030 330 ntBASIC5.45□□□□□ -1.54
PROM1O43490 PTP4A1P5-201ENST00000420305 455 ntBASIC5.45□□□□□ -1.54
PROM1O43490 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC5.45□□□□□ -1.54
PROM1O43490 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.45□□□□□ -1.54
PROM1O43490 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.45□□□□□ -1.54
PROM1O43490 AC090018.1-201ENST00000434369 367 ntBASIC5.45□□□□□ -1.54
PROM1O43490 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.45□□□□□ -1.54
PROM1O43490 MTND1P34-201ENST00000438556 671 ntBASIC5.45□□□□□ -1.54
PROM1O43490 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.45□□□□□ -1.54
PROM1O43490 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC5.45□□□□□ -1.54
PROM1O43490 MTCYBP12-201ENST00000440559 1134 ntBASIC5.45□□□□□ -1.54
PROM1O43490 AC073648.4-201ENST00000442655 781 ntBASIC5.45□□□□□ -1.54
PROM1O43490 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.45□□□□□ -1.54
PROM1O43490 OR7E116P-201ENST00000448529 957 ntBASIC5.45□□□□□ -1.54
PROM1O43490 MYO5BP2-201ENST00000449815 1277 ntBASIC5.45□□□□□ -1.54
PROM1O43490 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.45□□□□□ -1.54
PROM1O43490 RPS3AP43-201ENST00000479743 781 ntBASIC5.45□□□□□ -1.54
PROM1O43490 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PROM1O43490 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.45□□□□□ -1.54
PROM1O43490 AC107398.1-201ENST00000486904 505 ntBASIC5.45□□□□□ -1.54
PROM1O43490 RN7SL629P-201ENST00000489622 285 ntBASIC5.45□□□□□ -1.54
PROM1O43490 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC5.45□□□□□ -1.54
PROM1O43490 AC074255.1-201ENST00000511259 501 ntBASIC5.45□□□□□ -1.54
PROM1O43490 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.45□□□□□ -1.54
PROM1O43490 AC018442.3-201ENST00000523025 183 ntBASIC5.45□□□□□ -1.54
PROM1O43490 AC109635.6-201ENST00000525487 1113 ntBASIC5.45□□□□□ -1.54
PROM1O43490 OR4A43P-201ENST00000532938 908 ntBASIC5.45□□□□□ -1.54
PROM1O43490 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC5.45□□□□□ -1.54
PROM1O43490 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.45□□□□□ -1.54
PROM1O43490 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.45□□□□□ -1.54
PROM1O43490 AC008015.1-201ENST00000555505 465 ntBASIC5.45□□□□□ -1.54
PROM1O43490 AC096996.1-201ENST00000563813 325 ntBASIC5.45□□□□□ -1.54
PROM1O43490 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.45□□□□□ -1.54
PROM1O43490 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.45□□□□□ -1.54
PROM1O43490 MTND4LP24-201ENST00000572277 291 ntBASIC5.45□□□□□ -1.54
PROM1O43490 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.45□□□□□ -1.54
PROM1O43490 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.45□□□□□ -1.54
PROM1O43490 DPRXP5-201ENST00000604662 539 ntBASIC5.45□□□□□ -1.54
PROM1O43490 AL138478.1-201ENST00000612252 832 ntBASIC5.45□□□□□ -1.54
PROM1O43490 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PROM1O43490 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PROM1O43490 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.45□□□□□ -1.54
PROM1O43490 MIR1322-201ENST00000638013 71 ntBASIC5.45□□□□□ -1.54
PROM1O43490 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.45□□□□□ -1.54
PROM1O43490 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
PROM1O43490 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PROM1O43490 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.45□□□□□ -1.54
PROM1O43490 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PROM1O43490 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PROM1O43490 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.45□□□□□ -1.54
PROM1O43490 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PROM1O43490 AC114774.1-201ENST00000507410 1770 ntBASIC5.44□□□□□ -1.54
PROM1O43490 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
PROM1O43490 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PROM1O43490 BX005019.1-201ENST00000561881 1810 ntBASIC5.44□□□□□ -1.54
PROM1O43490 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms