Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 BTG3P1-201ENST00000435859 716 ntBASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC016831.4-201ENST00000438302 307 ntBASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 AL589765.3-201ENST00000446084 462 ntBASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 RPS23P7-201ENST00000466210 444 ntBASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC068587.1-201ENST00000483613 781 ntBASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 IGLV2-34-201ENST00000490007 283 ntBASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC084759.1-201ENST00000561168 290 ntBASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC068790.7-201ENST00000602347 528 ntBASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 IMMP1LP1-201ENST00000605170 488 ntBASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 AL049794.2-201ENST00000616301 365 ntBASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC108359.1-201ENST00000616451 1211 ntBASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 NCLP2-201ENST00000416078 1462 ntBASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 DHX40P1-201ENST00000588725 1412 ntBASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
TMX2-CTNND1H3BSU7 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
TMX2-CTNND1H3BSU7 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
TMX2-CTNND1H3BSU7 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
TMX2-CTNND1H3BSU7 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.71□□□□□ -1.66
TMX2-CTNND1H3BSU7 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
TMX2-CTNND1H3BSU7 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
TMX2-CTNND1H3BSU7 RNA5SP191-201ENST00000362585 102 ntBASIC4.71□□□□□ -1.66
TMX2-CTNND1H3BSU7 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.71□□□□□ -1.66
TMX2-CTNND1H3BSU7 SNORA70.10-201ENST00000384515 134 ntBASIC4.71□□□□□ -1.66
TMX2-CTNND1H3BSU7 SNORD96B-201ENST00000386148 79 ntBASIC4.71□□□□□ -1.66
TMX2-CTNND1H3BSU7 VDAC1P6-201ENST00000430062 855 ntBASIC4.71□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.71□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC005154.2-201ENST00000438110 379 ntBASIC4.71□□□□□ -1.66
TMX2-CTNND1H3BSU7 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.71□□□□□ -1.66
TMX2-CTNND1H3BSU7 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.71□□□□□ -1.66
TMX2-CTNND1H3BSU7 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.71□□□□□ -1.66
TMX2-CTNND1H3BSU7 MRPL35P2-201ENST00000448009 511 ntBASIC4.71□□□□□ -1.66
TMX2-CTNND1H3BSU7 CYCSP42-201ENST00000450823 238 ntBASIC4.71□□□□□ -1.66
TMX2-CTNND1H3BSU7 HMGB1P4-201ENST00000455362 567 ntBASIC4.71□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC108751.2-201ENST00000469993 231 ntBASIC4.71□□□□□ -1.66
TMX2-CTNND1H3BSU7 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.71□□□□□ -1.66
TMX2-CTNND1H3BSU7 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.71□□□□□ -1.66
TMX2-CTNND1H3BSU7 AK3P4-201ENST00000504283 583 ntBASIC4.71□□□□□ -1.66
TMX2-CTNND1H3BSU7 BUD31P1-201ENST00000521828 359 ntBASIC4.71□□□□□ -1.66
TMX2-CTNND1H3BSU7 AP000859.1-201ENST00000525536 307 ntBASIC4.71□□□□□ -1.66
TMX2-CTNND1H3BSU7 MORF4L1P3-201ENST00000525966 950 ntBASIC4.71□□□□□ -1.66
TMX2-CTNND1H3BSU7 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.71□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.71□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC068790.4-201ENST00000602474 263 ntBASIC4.71□□□□□ -1.66
TMX2-CTNND1H3BSU7 RPL26P30-202ENST00000602923 645 ntBASIC4.71□□□□□ -1.66
TMX2-CTNND1H3BSU7 RNF138P2-201ENST00000603490 592 ntBASIC4.71□□□□□ -1.66
TMX2-CTNND1H3BSU7 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.71□□□□□ -1.66
TMX2-CTNND1H3BSU7 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.71□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC007497.1-201ENST00000610421 561 ntBASIC4.71□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC006338.2-201ENST00000616864 791 ntBASIC4.71□□□□□ -1.66
TMX2-CTNND1H3BSU7 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.71□□□□□ -1.66
TMX2-CTNND1H3BSU7 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.71□□□□□ -1.66
TMX2-CTNND1H3BSU7 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TMX2-CTNND1H3BSU7 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TMX2-CTNND1H3BSU7 AL133268.1-201ENST00000405676 1401 ntBASIC4.71□□□□□ -1.66
TMX2-CTNND1H3BSU7 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.71□□□□□ -1.66
TMX2-CTNND1H3BSU7 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.71□□□□□ -1.66
TMX2-CTNND1H3BSU7 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TMX2-CTNND1H3BSU7 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.7□□□□□ -1.66
TMX2-CTNND1H3BSU7 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.7□□□□□ -1.66
TMX2-CTNND1H3BSU7 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.7□□□□□ -1.66
TMX2-CTNND1H3BSU7 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.7□□□□□ -1.66
TMX2-CTNND1H3BSU7 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.7□□□□□ -1.66
TMX2-CTNND1H3BSU7 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.7□□□□□ -1.66
TMX2-CTNND1H3BSU7 RNU4-44P-201ENST00000363050 141 ntBASIC4.7□□□□□ -1.66
TMX2-CTNND1H3BSU7 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.7□□□□□ -1.66
TMX2-CTNND1H3BSU7 GSTA7P-201ENST00000438425 448 ntBASIC4.7□□□□□ -1.66
TMX2-CTNND1H3BSU7 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.7□□□□□ -1.66
TMX2-CTNND1H3BSU7 AL162591.2-201ENST00000449634 317 ntBASIC4.7□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.7□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.7□□□□□ -1.66
TMX2-CTNND1H3BSU7 RNU6-1334P-201ENST00000516032 105 ntBASIC4.7□□□□□ -1.66
TMX2-CTNND1H3BSU7 Y_RNA.719-201ENST00000517156 106 ntBASIC4.7□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC012339.2-201ENST00000523996 453 ntBASIC4.7□□□□□ -1.66
TMX2-CTNND1H3BSU7 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC005868.1-201ENST00000536421 331 ntBASIC4.7□□□□□ -1.66
TMX2-CTNND1H3BSU7 PARP1P2-201ENST00000556806 195 ntBASIC4.7□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC209154.1-201ENST00000582156 337 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms