Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 MIR143-201ENST00000385300 106 ntBASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 AL136310.1-201ENST00000404926 654 ntBASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 RN7SKP229-201ENST00000410465 302 ntBASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 SSR1P2-201ENST00000415208 787 ntBASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 HMGB3P5-201ENST00000428894 612 ntBASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 FMO7P-201ENST00000436045 768 ntBASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 EEF1A1P39-201ENST00000440791 250 ntBASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 MRPL35P4-201ENST00000453682 566 ntBASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 NAP1L1P3-201ENST00000462291 880 ntBASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 RN7SL466P-201ENST00000497546 295 ntBASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 RN7SL284P-201ENST00000498823 275 ntBASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 GAPDHP62-201ENST00000515313 990 ntBASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 RNU6-416P-201ENST00000516265 103 ntBASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 SNORA81.2-201ENST00000516868 170 ntBASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 AC139103.1-201ENST00000534696 1030 ntBASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 AC124856.1-201ENST00000600819 896 ntBASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 AL035411.2-201ENST00000604022 421 ntBASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 AP000238.1-201ENST00000608759 426 ntBASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 AC109309.2-201ENST00000612597 332 ntBASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 AL049737.1-201ENST00000413920 1403 ntBASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 SGO1P1-201ENST00000603525 1447 ntBASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 AC107027.3-201ENST00000565095 3473 ntBASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 AC009962.1-201ENST00000567327 3813 ntBASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 AC005332.5-201ENST00000591222 2919 ntBASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 AP000432.2-201ENST00000624164 2048 ntBASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 RNA5SP131-201ENST00000365452 119 ntBASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 RNA5SP30-201ENST00000365552 115 ntBASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 MIR16-1-201ENST00000385271 89 ntBASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 AP002530.1-201ENST00000405705 684 ntBASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 RNU6-603P-201ENST00000411403 107 ntBASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 OR6E1P-201ENST00000414424 923 ntBASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 RNF10P1-201ENST00000418589 369 ntBASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 TNPO1P1-201ENST00000423641 1138 ntBASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 DNAJA1P1-201ENST00000425106 1187 ntBASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 HIGD1AP12-201ENST00000427832 281 ntBASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 RPL5P2-201ENST00000429598 854 ntBASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 AC112492.1-201ENST00000449607 712 ntBASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 RPL7L1P4-201ENST00000513004 707 ntBASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 EEF1A1P37-201ENST00000522748 715 ntBASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 AC044913.1-201ENST00000557200 430 ntBASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 PCNAP1-202ENST00000595299 752 ntBASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 AC234772.3-201ENST00000602277 528 ntBASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 AC022022.2-201ENST00000602989 360 ntBASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 AC098935.2-201ENST00000604222 466 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms