Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 RNA5SP335-201ENST00000363817 110 ntBASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 AC104297.1-201ENST00000393779 870 ntBASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 UBE2V1P11-201ENST00000411559 285 ntBASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 AC096921.1-201ENST00000411661 375 ntBASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 AL390774.1-201ENST00000411924 246 ntBASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 DNAJA1P1-201ENST00000425106 1187 ntBASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 RPP40P1-201ENST00000426762 456 ntBASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 NANOGP4-201ENST00000427230 913 ntBASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 AC022336.1-201ENST00000475510 337 ntBASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 AC079841.1-201ENST00000481228 950 ntBASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 ATP5LP5-201ENST00000483050 299 ntBASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 RPS21P4-201ENST00000487122 248 ntBASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 RPL32P9-201ENST00000487963 407 ntBASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 AC134050.1-201ENST00000495088 933 ntBASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 AK4P6-201ENST00000505168 528 ntBASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 HMGB1P40-201ENST00000525121 540 ntBASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 AL356057.1-201ENST00000533798 831 ntBASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 REXO2-218ENST00000544827 880 ntTSL 3 BASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 CYB5AP5-201ENST00000549779 389 ntBASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 ZNF321P-202ENST00000550843 495 ntBASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 BLZF2P-201ENST00000553776 1130 ntBASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 AC010503.3-201ENST00000594355 540 ntBASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 AC010487.1-201ENST00000594408 1172 ntBASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 AP002505.2-201ENST00000623585 696 ntBASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 MIR3974-201ENST00000637126 96 ntBASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 AL022311.1-201ENST00000623726 19416 ntBASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 SAMMSON-213ENST00000641336 1521 ntBASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
CTDP1Q9Y5B0 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.37□□□□□ -1.39
CTDP1Q9Y5B0 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.37□□□□□ -1.39
CTDP1Q9Y5B0 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CTDP1Q9Y5B0 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CTDP1Q9Y5B0 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CTDP1Q9Y5B0 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.37□□□□□ -1.39
CTDP1Q9Y5B0 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CTDP1Q9Y5B0 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CTDP1Q9Y5B0 RNU6-481P-201ENST00000384194 107 ntBASIC6.37□□□□□ -1.39
CTDP1Q9Y5B0 TAF9BP2-201ENST00000400856 499 ntBASIC6.37□□□□□ -1.39
CTDP1Q9Y5B0 DPPA2P3-201ENST00000411853 655 ntBASIC6.37□□□□□ -1.39
CTDP1Q9Y5B0 AC016907.1-201ENST00000419483 435 ntBASIC6.37□□□□□ -1.39
CTDP1Q9Y5B0 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC6.37□□□□□ -1.39
CTDP1Q9Y5B0 MTCO1P43-201ENST00000431831 488 ntBASIC6.37□□□□□ -1.39
CTDP1Q9Y5B0 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CTDP1Q9Y5B0 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC6.37□□□□□ -1.39
CTDP1Q9Y5B0 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6.37□□□□□ -1.39
CTDP1Q9Y5B0 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC6.37□□□□□ -1.39
CTDP1Q9Y5B0 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC6.37□□□□□ -1.39
CTDP1Q9Y5B0 RPL12P39-201ENST00000455456 496 ntBASIC6.37□□□□□ -1.39
CTDP1Q9Y5B0 RPS18P6-201ENST00000476880 458 ntBASIC6.37□□□□□ -1.39
CTDP1Q9Y5B0 STRADBP1-201ENST00000478954 1281 ntBASIC6.37□□□□□ -1.39
CTDP1Q9Y5B0 PGAM1P13-201ENST00000507497 754 ntBASIC6.37□□□□□ -1.39
CTDP1Q9Y5B0 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.37□□□□□ -1.39
CTDP1Q9Y5B0 MTND6P2-201ENST00000512226 524 ntBASIC6.37□□□□□ -1.39
CTDP1Q9Y5B0 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC6.37□□□□□ -1.39
CTDP1Q9Y5B0 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC6.37□□□□□ -1.39
CTDP1Q9Y5B0 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.37□□□□□ -1.39
CTDP1Q9Y5B0 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC6.37□□□□□ -1.39
CTDP1Q9Y5B0 MTCO3P22-201ENST00000603219 784 ntBASIC6.37□□□□□ -1.39
CTDP1Q9Y5B0 AC096586.1-201ENST00000610267 561 ntBASIC6.37□□□□□ -1.39
CTDP1Q9Y5B0 RPSAP73-201ENST00000614820 330 ntBASIC6.37□□□□□ -1.39
CTDP1Q9Y5B0 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.37□□□□□ -1.39
CTDP1Q9Y5B0 MIR6730-201ENST00000622213 67 ntBASIC6.37□□□□□ -1.39
CTDP1Q9Y5B0 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC6.37□□□□□ -1.39
CTDP1Q9Y5B0 AP005435.3-201ENST00000531260 3198 ntBASIC6.37□□□□□ -1.39
CTDP1Q9Y5B0 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CTDP1Q9Y5B0 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CTDP1Q9Y5B0 SCARNA15-201ENST00000607520 4325 ntBASIC6.37□□□□□ -1.39
CTDP1Q9Y5B0 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CTDP1Q9Y5B0 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms