Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL20A1Q9P218 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.88□□□□□ -1.47
COL20A1Q9P218 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
COL20A1Q9P218 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.88□□□□□ -1.47
COL20A1Q9P218 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL20A1Q9P218 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
COL20A1Q9P218 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
COL20A1Q9P218 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
COL20A1Q9P218 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
COL20A1Q9P218 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.87□□□□□ -1.47
COL20A1Q9P218 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
COL20A1Q9P218 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.87□□□□□ -1.47
COL20A1Q9P218 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
COL20A1Q9P218 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
COL20A1Q9P218 RNU6-729P-201ENST00000384399 107 ntBASIC5.87□□□□□ -1.47
COL20A1Q9P218 AL078599.1-201ENST00000402075 293 ntBASIC5.87□□□□□ -1.47
COL20A1Q9P218 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.87□□□□□ -1.47
COL20A1Q9P218 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
COL20A1Q9P218 DDX39BP1-205ENST00000422507 192 ntBASIC5.87□□□□□ -1.47
COL20A1Q9P218 OR6K4P-201ENST00000423179 955 ntBASIC5.87□□□□□ -1.47
COL20A1Q9P218 FO393419.3-201ENST00000428741 282 ntBASIC5.87□□□□□ -1.47
COL20A1Q9P218 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.87□□□□□ -1.47
COL20A1Q9P218 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC5.87□□□□□ -1.47
COL20A1Q9P218 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC5.87□□□□□ -1.47
COL20A1Q9P218 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.87□□□□□ -1.47
COL20A1Q9P218 Z80107.2-201ENST00000445127 392 ntBASIC5.87□□□□□ -1.47
COL20A1Q9P218 AC023271.1-201ENST00000445936 1090 ntBASIC5.87□□□□□ -1.47
COL20A1Q9P218 REG1CP-206ENST00000447469 496 ntBASIC5.87□□□□□ -1.47
COL20A1Q9P218 AL031313.1-201ENST00000448435 256 ntBASIC5.87□□□□□ -1.47
COL20A1Q9P218 RBMY2TP-201ENST00000451162 947 ntBASIC5.87□□□□□ -1.47
COL20A1Q9P218 Z95152.1-201ENST00000453556 656 ntBASIC5.87□□□□□ -1.47
COL20A1Q9P218 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.87□□□□□ -1.47
COL20A1Q9P218 RPS12P31-201ENST00000491419 398 ntBASIC5.87□□□□□ -1.47
COL20A1Q9P218 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.87□□□□□ -1.47
COL20A1Q9P218 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC5.87□□□□□ -1.47
COL20A1Q9P218 AC098862.1-201ENST00000504991 413 ntBASIC5.87□□□□□ -1.47
COL20A1Q9P218 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.87□□□□□ -1.47
COL20A1Q9P218 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.87□□□□□ -1.47
COL20A1Q9P218 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.87□□□□□ -1.47
COL20A1Q9P218 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC5.87□□□□□ -1.47
COL20A1Q9P218 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.87□□□□□ -1.47
COL20A1Q9P218 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.87□□□□□ -1.47
COL20A1Q9P218 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.87□□□□□ -1.47
COL20A1Q9P218 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
COL20A1Q9P218 AC068313.1-201ENST00000604028 1008 ntBASIC5.87□□□□□ -1.47
COL20A1Q9P218 FAM25E-202ENST00000608562 189 ntBASIC5.87□□□□□ -1.47
COL20A1Q9P218 AP001784.1-201ENST00000624107 428 ntBASIC5.87□□□□□ -1.47
COL20A1Q9P218 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
COL20A1Q9P218 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
COL20A1Q9P218 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
COL20A1Q9P218 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL20A1Q9P218 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.87□□□□□ -1.47
COL20A1Q9P218 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL20A1Q9P218 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL20A1Q9P218 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.87□□□□□ -1.47
COL20A1Q9P218 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.86□□□□□ -1.47
COL20A1Q9P218 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.86□□□□□ -1.47
COL20A1Q9P218 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL20A1Q9P218 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL20A1Q9P218 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL20A1Q9P218 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL20A1Q9P218 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL20A1Q9P218 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL20A1Q9P218 MTCO1P18-201ENST00000455518 1419 ntBASIC5.86□□□□□ -1.47
COL20A1Q9P218 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL20A1Q9P218 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
COL20A1Q9P218 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.86□□□□□ -1.47
COL20A1Q9P218 RN7SKP95-201ENST00000362860 303 ntBASIC5.86□□□□□ -1.47
COL20A1Q9P218 RNA5SP428-201ENST00000365129 132 ntBASIC5.86□□□□□ -1.47
COL20A1Q9P218 MIR142-201ENST00000384835 87 ntBASIC5.86□□□□□ -1.47
COL20A1Q9P218 RNU6-1320P-201ENST00000390838 107 ntBASIC5.86□□□□□ -1.47
COL20A1Q9P218 RNU6-1269P-201ENST00000391139 107 ntBASIC5.86□□□□□ -1.47
COL20A1Q9P218 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.86□□□□□ -1.47
COL20A1Q9P218 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.86□□□□□ -1.47
COL20A1Q9P218 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.86□□□□□ -1.47
COL20A1Q9P218 AC097499.1-201ENST00000444277 208 ntBASIC5.86□□□□□ -1.47
COL20A1Q9P218 MED28P3-201ENST00000444288 531 ntBASIC5.86□□□□□ -1.47
COL20A1Q9P218 RPL34P26-201ENST00000445636 354 ntBASIC5.86□□□□□ -1.47
COL20A1Q9P218 AC008280.2-201ENST00000455473 307 ntBASIC5.86□□□□□ -1.47
COL20A1Q9P218 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.86□□□□□ -1.47
COL20A1Q9P218 RNU6-599P-201ENST00000459383 107 ntBASIC5.86□□□□□ -1.47
COL20A1Q9P218 RNU6-1193P-201ENST00000459461 107 ntBASIC5.86□□□□□ -1.47
COL20A1Q9P218 RPS3AP41-201ENST00000462701 778 ntBASIC5.86□□□□□ -1.47
COL20A1Q9P218 RN7SL189P-201ENST00000468631 289 ntBASIC5.86□□□□□ -1.47
COL20A1Q9P218 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.86□□□□□ -1.47
COL20A1Q9P218 AC105233.1-201ENST00000498840 781 ntBASIC5.86□□□□□ -1.47
COL20A1Q9P218 AC026414.1-201ENST00000504046 698 ntBASIC5.86□□□□□ -1.47
COL20A1Q9P218 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.86□□□□□ -1.47
COL20A1Q9P218 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL20A1Q9P218 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
COL20A1Q9P218 IMPA1P1-201ENST00000510718 842 ntBASIC5.86□□□□□ -1.47
COL20A1Q9P218 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC5.86□□□□□ -1.47
COL20A1Q9P218 HIGD1AP18-201ENST00000520730 278 ntBASIC5.86□□□□□ -1.47
COL20A1Q9P218 AC011611.5-201ENST00000552477 578 ntBASIC5.86□□□□□ -1.47
COL20A1Q9P218 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.86□□□□□ -1.47
COL20A1Q9P218 AL109741.3-201ENST00000561748 592 ntBASIC5.86□□□□□ -1.47
COL20A1Q9P218 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.86□□□□□ -1.47
COL20A1Q9P218 MIR7853-201ENST00000584820 132 ntBASIC5.86□□□□□ -1.47
COL20A1Q9P218 AC105254.2-201ENST00000603636 436 ntBASIC5.86□□□□□ -1.47
COL20A1Q9P218 AL445435.1-201ENST00000604232 665 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms