Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
NDE1Q9NXR1 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.7□□□□□ -1.66
NDE1Q9NXR1 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NDE1Q9NXR1 AC098592.2-201ENST00000413158 265 ntBASIC4.7□□□□□ -1.66
NDE1Q9NXR1 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.7□□□□□ -1.66
NDE1Q9NXR1 OR51A6P-201ENST00000418680 1004 ntBASIC4.7□□□□□ -1.66
NDE1Q9NXR1 AL133325.1-201ENST00000421090 382 ntBASIC4.7□□□□□ -1.66
NDE1Q9NXR1 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.7□□□□□ -1.66
NDE1Q9NXR1 PLA2G12AP2-201ENST00000424744 264 ntBASIC4.7□□□□□ -1.66
NDE1Q9NXR1 RPS6P14-201ENST00000425165 719 ntBASIC4.7□□□□□ -1.66
NDE1Q9NXR1 AL445528.1-201ENST00000426330 420 ntBASIC4.7□□□□□ -1.66
NDE1Q9NXR1 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.7□□□□□ -1.66
NDE1Q9NXR1 AC005033.1-201ENST00000428904 813 ntBASIC4.7□□□□□ -1.66
NDE1Q9NXR1 AC079807.1-201ENST00000429993 481 ntBASIC4.7□□□□□ -1.66
NDE1Q9NXR1 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.7□□□□□ -1.66
NDE1Q9NXR1 MRPS33P4-201ENST00000434892 317 ntBASIC4.7□□□□□ -1.66
NDE1Q9NXR1 RAB9AP5-201ENST00000437794 597 ntBASIC4.7□□□□□ -1.66
NDE1Q9NXR1 RAB9AP2-201ENST00000443911 597 ntBASIC4.7□□□□□ -1.66
NDE1Q9NXR1 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.7□□□□□ -1.66
NDE1Q9NXR1 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.7□□□□□ -1.66
NDE1Q9NXR1 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NDE1Q9NXR1 AC239798.3-201ENST00000454459 408 ntBASIC4.7□□□□□ -1.66
NDE1Q9NXR1 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NDE1Q9NXR1 RPS21P4-201ENST00000487122 248 ntBASIC4.7□□□□□ -1.66
NDE1Q9NXR1 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.7□□□□□ -1.66
NDE1Q9NXR1 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.7□□□□□ -1.66
NDE1Q9NXR1 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.7□□□□□ -1.66
NDE1Q9NXR1 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.7□□□□□ -1.66
NDE1Q9NXR1 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.7□□□□□ -1.66
NDE1Q9NXR1 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NDE1Q9NXR1 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.7□□□□□ -1.66
NDE1Q9NXR1 SNORA74C-1-201ENST00000580726 201 ntBASIC4.7□□□□□ -1.66
NDE1Q9NXR1 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.7□□□□□ -1.66
NDE1Q9NXR1 MIR4505-201ENST00000582238 73 ntBASIC4.7□□□□□ -1.66
NDE1Q9NXR1 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.7□□□□□ -1.66
NDE1Q9NXR1 AC019206.1-201ENST00000621938 425 ntBASIC4.7□□□□□ -1.66
NDE1Q9NXR1 AP003499.2-201ENST00000624100 483 ntBASIC4.7□□□□□ -1.66
NDE1Q9NXR1 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.7□□□□□ -1.66
NDE1Q9NXR1 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.7□□□□□ -1.66
NDE1Q9NXR1 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.7□□□□□ -1.66
NDE1Q9NXR1 AP001002.1-201ENST00000625148 1513 ntBASIC4.7□□□□□ -1.66
NDE1Q9NXR1 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NDE1Q9NXR1 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NDE1Q9NXR1 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NDE1Q9NXR1 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
NDE1Q9NXR1 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
NDE1Q9NXR1 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
NDE1Q9NXR1 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.69□□□□□ -1.66
NDE1Q9NXR1 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.69□□□□□ -1.66
NDE1Q9NXR1 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NDE1Q9NXR1 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NDE1Q9NXR1 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NDE1Q9NXR1 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
NDE1Q9NXR1 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
NDE1Q9NXR1 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
NDE1Q9NXR1 AL672167.2-201ENST00000377164 879 ntBASIC4.69□□□□□ -1.66
NDE1Q9NXR1 AL080315.1-201ENST00000406055 466 ntBASIC4.69□□□□□ -1.66
NDE1Q9NXR1 RN7SKP240-201ENST00000410583 375 ntBASIC4.69□□□□□ -1.66
NDE1Q9NXR1 AL356968.2-201ENST00000412769 1257 ntBASIC4.69□□□□□ -1.66
NDE1Q9NXR1 VN1R31P-201ENST00000417498 730 ntBASIC4.69□□□□□ -1.66
NDE1Q9NXR1 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.69□□□□□ -1.66
NDE1Q9NXR1 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC4.69□□□□□ -1.66
NDE1Q9NXR1 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NDE1Q9NXR1 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.69□□□□□ -1.66
NDE1Q9NXR1 AC093414.1-201ENST00000434712 514 ntBASIC4.69□□□□□ -1.66
NDE1Q9NXR1 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.69□□□□□ -1.66
NDE1Q9NXR1 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.69□□□□□ -1.66
NDE1Q9NXR1 MTND2P25-201ENST00000449028 610 ntBASIC4.69□□□□□ -1.66
NDE1Q9NXR1 RPL7P45-201ENST00000455851 743 ntBASIC4.69□□□□□ -1.66
NDE1Q9NXR1 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.69□□□□□ -1.66
NDE1Q9NXR1 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.69□□□□□ -1.66
NDE1Q9NXR1 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.69□□□□□ -1.66
NDE1Q9NXR1 RNU6-941P-201ENST00000516346 108 ntBASIC4.69□□□□□ -1.66
NDE1Q9NXR1 NPM1P52-201ENST00000518264 846 ntBASIC4.69□□□□□ -1.66
NDE1Q9NXR1 AC018442.3-201ENST00000523025 183 ntBASIC4.69□□□□□ -1.66
NDE1Q9NXR1 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.69□□□□□ -1.66
NDE1Q9NXR1 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC4.69□□□□□ -1.66
NDE1Q9NXR1 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NDE1Q9NXR1 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.69□□□□□ -1.66
NDE1Q9NXR1 AC027281.1-201ENST00000574178 758 ntBASIC4.69□□□□□ -1.66
NDE1Q9NXR1 AC020978.7-201ENST00000575953 1187 ntBASIC4.69□□□□□ -1.66
NDE1Q9NXR1 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.69□□□□□ -1.66
NDE1Q9NXR1 MIR1273E-201ENST00000581165 102 ntBASIC4.69□□□□□ -1.66
NDE1Q9NXR1 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.69□□□□□ -1.66
NDE1Q9NXR1 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NDE1Q9NXR1 SLC25A36P1-201ENST00000590111 465 ntBASIC4.69□□□□□ -1.66
NDE1Q9NXR1 AC040174.2-201ENST00000602701 465 ntBASIC4.69□□□□□ -1.66
NDE1Q9NXR1 AL499605.1-201ENST00000604628 403 ntBASIC4.69□□□□□ -1.66
NDE1Q9NXR1 AC131238.1-201ENST00000617135 328 ntBASIC4.69□□□□□ -1.66
NDE1Q9NXR1 AC253576.2-201ENST00000618815 580 ntBASIC4.69□□□□□ -1.66
NDE1Q9NXR1 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.69□□□□□ -1.66
NDE1Q9NXR1 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.69□□□□□ -1.66
NDE1Q9NXR1 MIR8080-201ENST00000622224 89 ntBASIC4.69□□□□□ -1.66
NDE1Q9NXR1 AL391262.2-201ENST00000622466 494 ntBASIC4.69□□□□□ -1.66
NDE1Q9NXR1 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC4.69□□□□□ -1.66
NDE1Q9NXR1 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NDE1Q9NXR1 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NDE1Q9NXR1 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NDE1Q9NXR1 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NDE1Q9NXR1 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms