Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
TRIM4Q9C037 AL031320.1-201ENST00000604177 357 ntBASIC4.98□□□□□ -1.61
TRIM4Q9C037 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TRIM4Q9C037 AL392048.1-201ENST00000613946 534 ntBASIC4.98□□□□□ -1.61
TRIM4Q9C037 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.98□□□□□ -1.61
TRIM4Q9C037 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.98□□□□□ -1.61
TRIM4Q9C037 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TRIM4Q9C037 AL672167.1-205ENST00000641112 3080 ntBASIC4.98□□□□□ -1.61
TRIM4Q9C037 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TRIM4Q9C037 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
TRIM4Q9C037 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TRIM4Q9C037 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TRIM4Q9C037 AL133268.1-201ENST00000405676 1401 ntBASIC4.97□□□□□ -1.61
TRIM4Q9C037 AC006210.2-201ENST00000367074 1545 ntBASIC4.97□□□□□ -1.61
TRIM4Q9C037 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM4Q9C037 AC107068.1-201ENST00000563286 4218 ntBASIC4.97□□□□□ -1.61
TRIM4Q9C037 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM4Q9C037 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM4Q9C037 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM4Q9C037 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
TRIM4Q9C037 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM4Q9C037 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
TRIM4Q9C037 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM4Q9C037 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.97□□□□□ -1.61
TRIM4Q9C037 SNORA17.1-201ENST00000362945 126 ntBASIC4.97□□□□□ -1.61
TRIM4Q9C037 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM4Q9C037 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM4Q9C037 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.97□□□□□ -1.61
TRIM4Q9C037 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.97□□□□□ -1.61
TRIM4Q9C037 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.97□□□□□ -1.61
TRIM4Q9C037 AC007064.3-201ENST00000422608 359 ntBASIC4.97□□□□□ -1.61
TRIM4Q9C037 AC009480.2-201ENST00000422916 432 ntBASIC4.97□□□□□ -1.61
TRIM4Q9C037 HSPE1P27-201ENST00000430808 296 ntBASIC4.97□□□□□ -1.61
TRIM4Q9C037 RPL7AP61-201ENST00000443410 636 ntBASIC4.97□□□□□ -1.61
TRIM4Q9C037 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.97□□□□□ -1.61
TRIM4Q9C037 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.97□□□□□ -1.61
TRIM4Q9C037 FGF7P3-201ENST00000454645 303 ntBASIC4.97□□□□□ -1.61
TRIM4Q9C037 AC108751.2-201ENST00000469993 231 ntBASIC4.97□□□□□ -1.61
TRIM4Q9C037 AC090686.1-201ENST00000481577 749 ntBASIC4.97□□□□□ -1.61
TRIM4Q9C037 PPM1AP1-201ENST00000502740 1135 ntBASIC4.97□□□□□ -1.61
TRIM4Q9C037 STMN1P2-201ENST00000508435 439 ntBASIC4.97□□□□□ -1.61
TRIM4Q9C037 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.97□□□□□ -1.61
TRIM4Q9C037 IGKV2D-10-201ENST00000520194 281 ntBASIC4.97□□□□□ -1.61
TRIM4Q9C037 AC022360.1-201ENST00000521058 340 ntBASIC4.97□□□□□ -1.61
TRIM4Q9C037 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.97□□□□□ -1.61
TRIM4Q9C037 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
TRIM4Q9C037 AC005341.1-201ENST00000571086 708 ntBASIC4.97□□□□□ -1.61
TRIM4Q9C037 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.97□□□□□ -1.61
TRIM4Q9C037 BNIP3P33-201ENST00000598912 569 ntBASIC4.97□□□□□ -1.61
TRIM4Q9C037 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.97□□□□□ -1.61
TRIM4Q9C037 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.97□□□□□ -1.61
TRIM4Q9C037 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.97□□□□□ -1.61
TRIM4Q9C037 AC091905.4-201ENST00000623432 202 ntBASIC4.97□□□□□ -1.61
TRIM4Q9C037 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
TRIM4Q9C037 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM4Q9C037 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
TRIM4Q9C037 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM4Q9C037 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.97□□□□□ -1.61
TRIM4Q9C037 IRF5P1-201ENST00000504852 2164 ntBASIC4.97□□□□□ -1.61
TRIM4Q9C037 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
TRIM4Q9C037 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.96□□□□□ -1.61
TRIM4Q9C037 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.96□□□□□ -1.61
TRIM4Q9C037 AC132825.1-201ENST00000463573 2247 ntBASIC4.96□□□□□ -1.62
TRIM4Q9C037 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TRIM4Q9C037 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.62
TRIM4Q9C037 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
TRIM4Q9C037 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
TRIM4Q9C037 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TRIM4Q9C037 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.62
TRIM4Q9C037 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
TRIM4Q9C037 AC068538.1-201ENST00000376856 336 ntBASIC4.96□□□□□ -1.62
TRIM4Q9C037 LAP3P1-201ENST00000403648 294 ntBASIC4.96□□□□□ -1.62
TRIM4Q9C037 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TRIM4Q9C037 CYP4F29P-201ENST00000420685 446 ntBASIC4.96□□□□□ -1.62
TRIM4Q9C037 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.96□□□□□ -1.62
TRIM4Q9C037 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.96□□□□□ -1.62
TRIM4Q9C037 AC068287.1-201ENST00000430283 295 ntBASIC4.96□□□□□ -1.62
TRIM4Q9C037 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.96□□□□□ -1.62
TRIM4Q9C037 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.96□□□□□ -1.62
TRIM4Q9C037 ARL4AP3-201ENST00000441452 574 ntBASIC4.96□□□□□ -1.62
TRIM4Q9C037 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.96□□□□□ -1.62
TRIM4Q9C037 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.96□□□□□ -1.62
TRIM4Q9C037 MRPL35P2-201ENST00000448009 511 ntBASIC4.96□□□□□ -1.62
TRIM4Q9C037 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.96□□□□□ -1.62
TRIM4Q9C037 AC234781.3-201ENST00000452540 973 ntBASIC4.96□□□□□ -1.62
TRIM4Q9C037 AC005008.1-201ENST00000456151 612 ntBASIC4.96□□□□□ -1.62
TRIM4Q9C037 AC079168.1-201ENST00000458741 345 ntBASIC4.96□□□□□ -1.62
TRIM4Q9C037 RPS23P7-201ENST00000466210 444 ntBASIC4.96□□□□□ -1.62
TRIM4Q9C037 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.96□□□□□ -1.62
TRIM4Q9C037 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.96□□□□□ -1.62
TRIM4Q9C037 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.96□□□□□ -1.62
TRIM4Q9C037 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.96□□□□□ -1.62
TRIM4Q9C037 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.96□□□□□ -1.62
TRIM4Q9C037 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.96□□□□□ -1.62
TRIM4Q9C037 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.96□□□□□ -1.62
TRIM4Q9C037 AC060766.1-201ENST00000590824 627 ntBASIC4.96□□□□□ -1.62
TRIM4Q9C037 AC107993.1-201ENST00000591343 684 ntBASIC4.96□□□□□ -1.62
TRIM4Q9C037 RPL26P30-202ENST00000602923 645 ntBASIC4.96□□□□□ -1.62
TRIM4Q9C037 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.96□□□□□ -1.62
TRIM4Q9C037 AC067931.1-201ENST00000624190 671 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms