Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC5.93□□□□□ -1.46
SHANK3Q9BYB0 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
SHANK3Q9BYB0 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SHANK3Q9BYB0 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC5.93□□□□□ -1.46
SHANK3Q9BYB0 ADAM5-202ENST00000399789 1942 ntBASIC5.93□□□□□ -1.46
SHANK3Q9BYB0 AL158163.1-201ENST00000603915 1649 ntBASIC5.93□□□□□ -1.46
SHANK3Q9BYB0 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.93□□□□□ -1.46
SHANK3Q9BYB0 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC5.93□□□□□ -1.46
SHANK3Q9BYB0 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
SHANK3Q9BYB0 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.93□□□□□ -1.46
SHANK3Q9BYB0 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SHANK3Q9BYB0 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SHANK3Q9BYB0 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SHANK3Q9BYB0 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
SHANK3Q9BYB0 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SHANK3Q9BYB0 MIR372-201ENST00000362225 67 ntBASIC5.93□□□□□ -1.46
SHANK3Q9BYB0 RN7SKP177-201ENST00000410567 355 ntBASIC5.93□□□□□ -1.46
SHANK3Q9BYB0 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SHANK3Q9BYB0 Z74021.1-201ENST00000423610 407 ntBASIC5.93□□□□□ -1.46
SHANK3Q9BYB0 NPM1P26-201ENST00000426339 738 ntBASIC5.93□□□□□ -1.46
SHANK3Q9BYB0 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.93□□□□□ -1.46
SHANK3Q9BYB0 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.93□□□□□ -1.46
SHANK3Q9BYB0 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC5.93□□□□□ -1.46
SHANK3Q9BYB0 RHEBP2-201ENST00000450289 600 ntBASIC5.93□□□□□ -1.46
SHANK3Q9BYB0 AC079804.1-201ENST00000461922 436 ntBASIC5.93□□□□□ -1.46
SHANK3Q9BYB0 MTND4LP31-201ENST00000514859 294 ntBASIC5.93□□□□□ -1.46
SHANK3Q9BYB0 RN7SKP83-201ENST00000516512 178 ntBASIC5.93□□□□□ -1.46
SHANK3Q9BYB0 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.93□□□□□ -1.46
SHANK3Q9BYB0 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.93□□□□□ -1.46
SHANK3Q9BYB0 AC011471.1-201ENST00000585766 187 ntBASIC5.93□□□□□ -1.46
SHANK3Q9BYB0 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.93□□□□□ -1.46
SHANK3Q9BYB0 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SHANK3Q9BYB0 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SHANK3Q9BYB0 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SHANK3Q9BYB0 AL161912.2-201ENST00000565707 3007 ntBASIC5.93□□□□□ -1.46
SHANK3Q9BYB0 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHANK3Q9BYB0 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
SHANK3Q9BYB0 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.92□□□□□ -1.46
SHANK3Q9BYB0 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHANK3Q9BYB0 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHANK3Q9BYB0 LARP1BP1-201ENST00000506036 1359 ntBASIC5.92□□□□□ -1.46
SHANK3Q9BYB0 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.92□□□□□ -1.46
SHANK3Q9BYB0 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHANK3Q9BYB0 NDUFB4P4-201ENST00000404822 243 ntBASIC5.92□□□□□ -1.46
SHANK3Q9BYB0 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC5.92□□□□□ -1.46
SHANK3Q9BYB0 RN7SL303P-201ENST00000469773 251 ntBASIC5.92□□□□□ -1.46
SHANK3Q9BYB0 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.92□□□□□ -1.46
SHANK3Q9BYB0 OR5D2P-201ENST00000524390 911 ntBASIC5.92□□□□□ -1.46
SHANK3Q9BYB0 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHANK3Q9BYB0 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.92□□□□□ -1.46
SHANK3Q9BYB0 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.92□□□□□ -1.46
SHANK3Q9BYB0 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.92□□□□□ -1.46
SHANK3Q9BYB0 AC007179.3-201ENST00000604976 235 ntBASIC5.92□□□□□ -1.46
SHANK3Q9BYB0 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.92□□□□□ -1.46
SHANK3Q9BYB0 AC012442.3-202ENST00000636742 206 ntBASIC5.92□□□□□ -1.46
SHANK3Q9BYB0 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SHANK3Q9BYB0 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC5.92□□□□□ -1.46
SHANK3Q9BYB0 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SHANK3Q9BYB0 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHANK3Q9BYB0 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHANK3Q9BYB0 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHANK3Q9BYB0 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SHANK3Q9BYB0 PCAT14-202ENST00000627127 3935 ntBASIC5.92□□□□□ -1.46
SHANK3Q9BYB0 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.92□□□□□ -1.46
SHANK3Q9BYB0 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHANK3Q9BYB0 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.91□□□□□ -1.46
SHANK3Q9BYB0 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHANK3Q9BYB0 MIR634-201ENST00000385208 97 ntBASIC5.91□□□□□ -1.46
SHANK3Q9BYB0 AL161909.1-201ENST00000397390 712 ntBASIC5.91□□□□□ -1.46
SHANK3Q9BYB0 RPL21P65-201ENST00000406094 466 ntBASIC5.91□□□□□ -1.46
SHANK3Q9BYB0 CYCSP24-201ENST00000445119 316 ntBASIC5.91□□□□□ -1.46
SHANK3Q9BYB0 AC093166.2-201ENST00000455969 1017 ntBASIC5.91□□□□□ -1.46
SHANK3Q9BYB0 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC5.91□□□□□ -1.46
SHANK3Q9BYB0 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.91□□□□□ -1.46
SHANK3Q9BYB0 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.91□□□□□ -1.46
SHANK3Q9BYB0 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.91□□□□□ -1.46
SHANK3Q9BYB0 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.91□□□□□ -1.46
SHANK3Q9BYB0 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.91□□□□□ -1.46
SHANK3Q9BYB0 AC015914.2-201ENST00000618167 288 ntBASIC5.91□□□□□ -1.46
SHANK3Q9BYB0 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SHANK3Q9BYB0 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHANK3Q9BYB0 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SHANK3Q9BYB0 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC5.91□□□□□ -1.46
SHANK3Q9BYB0 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHANK3Q9BYB0 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SHANK3Q9BYB0 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SHANK3Q9BYB0 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHANK3Q9BYB0 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHANK3Q9BYB0 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.91□□□□□ -1.46
SHANK3Q9BYB0 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SHANK3Q9BYB0 RNA5SP283-201ENST00000365604 119 ntBASIC5.91□□□□□ -1.46
SHANK3Q9BYB0 SDHCP2-201ENST00000398565 501 ntBASIC5.91□□□□□ -1.46
SHANK3Q9BYB0 AC079809.1-201ENST00000415468 276 ntBASIC5.91□□□□□ -1.46
SHANK3Q9BYB0 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SHANK3Q9BYB0 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.91□□□□□ -1.46
SHANK3Q9BYB0 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.91□□□□□ -1.46
SHANK3Q9BYB0 AC091959.2-201ENST00000477363 321 ntBASIC5.91□□□□□ -1.46
SHANK3Q9BYB0 RPL35P6-201ENST00000490024 372 ntBASIC5.91□□□□□ -1.46
SHANK3Q9BYB0 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SHANK3Q9BYB0 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms