Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
RTFDC1Q9BY42 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
RTFDC1Q9BY42 U3.23-201ENST00000391132 200 ntBASIC6.39□□□□□ -1.39
RTFDC1Q9BY42 RPS27AP11-201ENST00000402798 447 ntBASIC6.39□□□□□ -1.39
RTFDC1Q9BY42 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC6.39□□□□□ -1.39
RTFDC1Q9BY42 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC6.39□□□□□ -1.39
RTFDC1Q9BY42 AC091390.1-201ENST00000433904 331 ntBASIC6.39□□□□□ -1.39
RTFDC1Q9BY42 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC6.39□□□□□ -1.39
RTFDC1Q9BY42 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RTFDC1Q9BY42 DUXAP8-207ENST00000456786 622 ntBASIC6.39□□□□□ -1.39
RTFDC1Q9BY42 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC6.39□□□□□ -1.39
RTFDC1Q9BY42 RPL21P18-201ENST00000469899 480 ntBASIC6.39□□□□□ -1.39
RTFDC1Q9BY42 RN7SL459P-201ENST00000481078 302 ntBASIC6.39□□□□□ -1.39
RTFDC1Q9BY42 PRELID3BP6-201ENST00000503839 571 ntBASIC6.39□□□□□ -1.39
RTFDC1Q9BY42 AC026414.1-201ENST00000504046 698 ntBASIC6.39□□□□□ -1.39
RTFDC1Q9BY42 FGB-207ENST00000509493 1164 ntTSL 5 BASIC6.39□□□□□ -1.39
RTFDC1Q9BY42 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC6.39□□□□□ -1.39
RTFDC1Q9BY42 RN7SKP67-201ENST00000515905 235 ntBASIC6.39□□□□□ -1.39
RTFDC1Q9BY42 SCARNA20.4-201ENST00000516969 131 ntBASIC6.39□□□□□ -1.39
RTFDC1Q9BY42 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC6.39□□□□□ -1.39
RTFDC1Q9BY42 HMGB1P1-201ENST00000522557 636 ntBASIC6.39□□□□□ -1.39
RTFDC1Q9BY42 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC6.39□□□□□ -1.39
RTFDC1Q9BY42 AC011611.5-201ENST00000552477 578 ntBASIC6.39□□□□□ -1.39
RTFDC1Q9BY42 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC6.39□□□□□ -1.39
RTFDC1Q9BY42 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RTFDC1Q9BY42 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
RTFDC1Q9BY42 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RTFDC1Q9BY42 AC091057.3-201ENST00000602684 733 ntBASIC6.39□□□□□ -1.39
RTFDC1Q9BY42 MEMO1P5-201ENST00000604810 406 ntBASIC6.39□□□□□ -1.39
RTFDC1Q9BY42 AC099785.1-201ENST00000605697 437 ntBASIC6.39□□□□□ -1.39
RTFDC1Q9BY42 OR2BH1P-201ENST00000608850 864 ntBASIC6.39□□□□□ -1.39
RTFDC1Q9BY42 DUXAP10-204ENST00000612052 616 ntBASIC6.39□□□□□ -1.39
RTFDC1Q9BY42 AC015712.7-201ENST00000615211 635 ntBASIC6.39□□□□□ -1.39
RTFDC1Q9BY42 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.39□□□□□ -1.39
RTFDC1Q9BY42 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.39□□□□□ -1.39
RTFDC1Q9BY42 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.39□□□□□ -1.39
RTFDC1Q9BY42 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
RTFDC1Q9BY42 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
RTFDC1Q9BY42 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RTFDC1Q9BY42 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RTFDC1Q9BY42 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.39□□□□□ -1.39
RTFDC1Q9BY42 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RTFDC1Q9BY42 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
RTFDC1Q9BY42 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
RTFDC1Q9BY42 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RTFDC1Q9BY42 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.38□□□□□ -1.39
RTFDC1Q9BY42 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
RTFDC1Q9BY42 RNU5E-10P-201ENST00000363506 118 ntBASIC6.38□□□□□ -1.39
RTFDC1Q9BY42 RN7SKP113-201ENST00000363891 295 ntBASIC6.38□□□□□ -1.39
RTFDC1Q9BY42 RNU6-398P-201ENST00000384143 109 ntBASIC6.38□□□□□ -1.39
RTFDC1Q9BY42 RNU6-1005P-201ENST00000384519 107 ntBASIC6.38□□□□□ -1.39
RTFDC1Q9BY42 MIR320B1-201ENST00000390209 79 ntBASIC6.38□□□□□ -1.39
RTFDC1Q9BY42 AL445183.3-201ENST00000414168 502 ntBASIC6.38□□□□□ -1.39
RTFDC1Q9BY42 LIPT1P1-201ENST00000415870 1186 ntBASIC6.38□□□□□ -1.39
RTFDC1Q9BY42 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC6.38□□□□□ -1.39
RTFDC1Q9BY42 HSPD1P12-201ENST00000429127 1069 ntBASIC6.38□□□□□ -1.39
RTFDC1Q9BY42 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RTFDC1Q9BY42 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC6.38□□□□□ -1.39
RTFDC1Q9BY42 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC6.38□□□□□ -1.39
RTFDC1Q9BY42 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC6.38□□□□□ -1.39
RTFDC1Q9BY42 AL096803.2-201ENST00000450032 677 ntBASIC6.38□□□□□ -1.39
RTFDC1Q9BY42 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC6.38□□□□□ -1.39
RTFDC1Q9BY42 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC6.38□□□□□ -1.39
RTFDC1Q9BY42 AC140172.1-201ENST00000502928 141 ntBASIC6.38□□□□□ -1.39
RTFDC1Q9BY42 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC6.38□□□□□ -1.39
RTFDC1Q9BY42 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.38□□□□□ -1.39
RTFDC1Q9BY42 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC6.38□□□□□ -1.39
RTFDC1Q9BY42 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC6.38□□□□□ -1.39
RTFDC1Q9BY42 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC6.38□□□□□ -1.39
RTFDC1Q9BY42 AP002906.1-201ENST00000603405 233 ntBASIC6.38□□□□□ -1.39
RTFDC1Q9BY42 AC008814.1-201ENST00000603797 406 ntBASIC6.38□□□□□ -1.39
RTFDC1Q9BY42 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC6.38□□□□□ -1.39
RTFDC1Q9BY42 AL121652.1-201ENST00000608851 448 ntBASIC6.38□□□□□ -1.39
RTFDC1Q9BY42 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RTFDC1Q9BY42 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RTFDC1Q9BY42 AC007342.8-201ENST00000623278 678 ntBASIC6.38□□□□□ -1.39
RTFDC1Q9BY42 AC021106.3-201ENST00000623925 531 ntBASIC6.38□□□□□ -1.39
RTFDC1Q9BY42 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC6.38□□□□□ -1.39
RTFDC1Q9BY42 AL022323.4-201ENST00000623980 13120 ntBASIC6.38□□□□□ -1.39
RTFDC1Q9BY42 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RTFDC1Q9BY42 AC097461.1-201ENST00000568928 2821 ntBASIC6.38□□□□□ -1.39
RTFDC1Q9BY42 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
RTFDC1Q9BY42 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RTFDC1Q9BY42 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RTFDC1Q9BY42 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
RTFDC1Q9BY42 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RTFDC1Q9BY42 AC232271.1-201ENST00000602455 2715 ntBASIC6.37□□□□□ -1.39
RTFDC1Q9BY42 AC068870.3-201ENST00000625077 2536 ntBASIC6.37□□□□□ -1.39
RTFDC1Q9BY42 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RTFDC1Q9BY42 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RTFDC1Q9BY42 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
RTFDC1Q9BY42 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.37□□□□□ -1.39
RTFDC1Q9BY42 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
RTFDC1Q9BY42 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RTFDC1Q9BY42 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC6.37□□□□□ -1.39
RTFDC1Q9BY42 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC6.37□□□□□ -1.39
RTFDC1Q9BY42 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
RTFDC1Q9BY42 RN7SKP114-201ENST00000410327 279 ntBASIC6.37□□□□□ -1.39
RTFDC1Q9BY42 AC010385.1-201ENST00000412374 256 ntBASIC6.37□□□□□ -1.39
RTFDC1Q9BY42 AC019050.1-201ENST00000418508 492 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms