Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC7.03□□□□□ -1.28
SCAPERQ9BY12 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC7.03□□□□□ -1.28
SCAPERQ9BY12 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SCAPERQ9BY12 AC006946.1-201ENST00000429106 328 ntBASIC7.03□□□□□ -1.28
SCAPERQ9BY12 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC7.03□□□□□ -1.28
SCAPERQ9BY12 HSFY6P-201ENST00000445573 403 ntBASIC7.03□□□□□ -1.28
SCAPERQ9BY12 OR52E3P-201ENST00000452083 936 ntBASIC7.03□□□□□ -1.28
SCAPERQ9BY12 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC7.03□□□□□ -1.28
SCAPERQ9BY12 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC7.03□□□□□ -1.28
SCAPERQ9BY12 AC138832.1-201ENST00000522871 556 ntBASIC7.03□□□□□ -1.28
SCAPERQ9BY12 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SCAPERQ9BY12 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
SCAPERQ9BY12 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC7.03□□□□□ -1.28
SCAPERQ9BY12 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
SCAPERQ9BY12 MIR4444-1-201ENST00000581696 74 ntBASIC7.03□□□□□ -1.28
SCAPERQ9BY12 MIR4444-2-201ENST00000584390 74 ntBASIC7.03□□□□□ -1.28
SCAPERQ9BY12 AC002069.2-201ENST00000603580 883 ntBASIC7.03□□□□□ -1.28
SCAPERQ9BY12 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC7.03□□□□□ -1.28
SCAPERQ9BY12 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SCAPERQ9BY12 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SCAPERQ9BY12 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
SCAPERQ9BY12 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
SCAPERQ9BY12 PTER-201ENST00000298942 3448 ntTSL 5 BASIC7.03□□□□□ -1.28
SCAPERQ9BY12 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SCAPERQ9BY12 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC7.02□□□□□ -1.28
SCAPERQ9BY12 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
SCAPERQ9BY12 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC7.02□□□□□ -1.28
SCAPERQ9BY12 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SCAPERQ9BY12 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SCAPERQ9BY12 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
SCAPERQ9BY12 RNA5SP187-201ENST00000384400 119 ntBASIC7.02□□□□□ -1.29
SCAPERQ9BY12 COX5BP7-201ENST00000414780 274 ntBASIC7.02□□□□□ -1.29
SCAPERQ9BY12 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC7.02□□□□□ -1.29
SCAPERQ9BY12 NDUFB4P12-201ENST00000513465 390 ntBASIC7.02□□□□□ -1.29
SCAPERQ9BY12 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC7.02□□□□□ -1.29
SCAPERQ9BY12 OR8R1P-201ENST00000543943 764 ntBASIC7.02□□□□□ -1.29
SCAPERQ9BY12 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC7.02□□□□□ -1.29
SCAPERQ9BY12 IGKV1OR2-118-201ENST00000603238 347 ntBASIC7.02□□□□□ -1.29
SCAPERQ9BY12 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC7.02□□□□□ -1.29
SCAPERQ9BY12 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC7.02□□□□□ -1.29
SCAPERQ9BY12 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
SCAPERQ9BY12 AC090017.1-201ENST00000548612 1779 ntBASIC7.02□□□□□ -1.29
SCAPERQ9BY12 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC7.02□□□□□ -1.29
SCAPERQ9BY12 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SCAPERQ9BY12 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SCAPERQ9BY12 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
SCAPERQ9BY12 RAB9AP4-201ENST00000415230 609 ntBASIC7.01□□□□□ -1.29
SCAPERQ9BY12 AC079809.1-201ENST00000415468 276 ntBASIC7.01□□□□□ -1.29
SCAPERQ9BY12 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC7.01□□□□□ -1.29
SCAPERQ9BY12 AL132765.1-201ENST00000434165 553 ntBASIC7.01□□□□□ -1.29
SCAPERQ9BY12 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC7.01□□□□□ -1.29
SCAPERQ9BY12 AC025164.1-201ENST00000496249 478 ntBASIC7.01□□□□□ -1.29
SCAPERQ9BY12 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC7.01□□□□□ -1.29
SCAPERQ9BY12 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC7.01□□□□□ -1.29
SCAPERQ9BY12 TRAV8-5-201ENST00000537369 341 ntBASIC7.01□□□□□ -1.29
SCAPERQ9BY12 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC7.01□□□□□ -1.29
SCAPERQ9BY12 MIR3158-1-201ENST00000583596 81 ntBASIC7.01□□□□□ -1.29
SCAPERQ9BY12 AP001160.4-201ENST00000596971 382 ntBASIC7.01□□□□□ -1.29
SCAPERQ9BY12 AC091979.2-201ENST00000607514 214 ntBASIC7.01□□□□□ -1.29
SCAPERQ9BY12 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
SCAPERQ9BY12 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
SCAPERQ9BY12 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
SCAPERQ9BY12 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC7.01□□□□□ -1.29
SCAPERQ9BY12 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
SCAPERQ9BY12 RNU1-130P-201ENST00000363930 160 ntBASIC7.01□□□□□ -1.29
SCAPERQ9BY12 RNA5SP44-201ENST00000410446 133 ntBASIC7.01□□□□□ -1.29
SCAPERQ9BY12 RN7SL542P-201ENST00000467147 294 ntBASIC7.01□□□□□ -1.29
SCAPERQ9BY12 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC7.01□□□□□ -1.29
SCAPERQ9BY12 TBCA-207ENST00000520039 157 ntTSL 3 BASIC7.01□□□□□ -1.29
SCAPERQ9BY12 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC7.01□□□□□ -1.29
SCAPERQ9BY12 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC7.01□□□□□ -1.29
SCAPERQ9BY12 AC099676.1-201ENST00000608886 657 ntBASIC7.01□□□□□ -1.29
SCAPERQ9BY12 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC7.01□□□□□ -1.29
SCAPERQ9BY12 AC112200.1-201ENST00000625015 234 ntBASIC7.01□□□□□ -1.29
SCAPERQ9BY12 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC7.01□□□□□ -1.29
SCAPERQ9BY12 VN2R3P-201ENST00000422626 1412 ntBASIC7□□□□□ -1.29
SCAPERQ9BY12 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
SCAPERQ9BY12 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC7□□□□□ -1.29
SCAPERQ9BY12 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC7□□□□□ -1.29
SCAPERQ9BY12 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SCAPERQ9BY12 SNORA70.4-201ENST00000365509 134 ntBASIC7□□□□□ -1.29
SCAPERQ9BY12 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC7□□□□□ -1.29
SCAPERQ9BY12 ARL4AP5-201ENST00000404372 599 ntBASIC7□□□□□ -1.29
SCAPERQ9BY12 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC7□□□□□ -1.29
SCAPERQ9BY12 VN1R37P-201ENST00000419096 748 ntBASIC7□□□□□ -1.29
SCAPERQ9BY12 AP001324.1-201ENST00000428553 399 ntBASIC7□□□□□ -1.29
SCAPERQ9BY12 AC092162.1-201ENST00000432828 434 ntBASIC7□□□□□ -1.29
SCAPERQ9BY12 RNA5SP230-201ENST00000517039 122 ntBASIC7□□□□□ -1.29
SCAPERQ9BY12 MTCO1P49-201ENST00000523429 802 ntBASIC7□□□□□ -1.29
SCAPERQ9BY12 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC7□□□□□ -1.29
SCAPERQ9BY12 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC7□□□□□ -1.29
SCAPERQ9BY12 AC011447.7-201ENST00000624228 1590 ntBASIC7□□□□□ -1.29
SCAPERQ9BY12 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SCAPERQ9BY12 AC108467.2-201ENST00000617640 1597 ntBASIC6.99□□□□□ -1.29
SCAPERQ9BY12 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SCAPERQ9BY12 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SCAPERQ9BY12 SPRR2C-201ENST00000290702 219 ntBASIC6.99□□□□□ -1.29
SCAPERQ9BY12 ATP5F1P3-201ENST00000397213 657 ntBASIC6.99□□□□□ -1.29
SCAPERQ9BY12 OR13Z1P-201ENST00000416141 834 ntBASIC6.99□□□□□ -1.29
SCAPERQ9BY12 RCC2P2-201ENST00000422174 918 ntBASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms