Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC7.58□□□□□ -1.2
IFT140Q96RY7 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
IFT140Q96RY7 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC7.58□□□□□ -1.2
IFT140Q96RY7 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC7.58□□□□□ -1.2
IFT140Q96RY7 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
IFT140Q96RY7 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC7.58□□□□□ -1.2
IFT140Q96RY7 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC7.58□□□□□ -1.2
IFT140Q96RY7 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
IFT140Q96RY7 AL158163.1-201ENST00000603915 1649 ntBASIC7.58□□□□□ -1.2
IFT140Q96RY7 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC7.58□□□□□ -1.2
IFT140Q96RY7 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
IFT140Q96RY7 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
IFT140Q96RY7 RN7SKP17-201ENST00000411242 351 ntBASIC7.57□□□□□ -1.2
IFT140Q96RY7 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC7.57□□□□□ -1.2
IFT140Q96RY7 RPL23AP52-201ENST00000439311 478 ntBASIC7.57□□□□□ -1.2
IFT140Q96RY7 RPS29P7-201ENST00000439662 171 ntBASIC7.57□□□□□ -1.2
IFT140Q96RY7 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC7.57□□□□□ -1.2
IFT140Q96RY7 AC244100.1-202ENST00000621554 382 ntBASIC7.57□□□□□ -1.2
IFT140Q96RY7 AC091953.5-201ENST00000622919 233 ntBASIC7.57□□□□□ -1.2
IFT140Q96RY7 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
IFT140Q96RY7 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC7.57□□□□□ -1.2
IFT140Q96RY7 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
IFT140Q96RY7 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
IFT140Q96RY7 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC7.57□□□□□ -1.2
IFT140Q96RY7 AP005432.1-201ENST00000580891 3485 ntBASIC7.57□□□□□ -1.2
IFT140Q96RY7 ACTR3BP5-201ENST00000448440 1479 ntBASIC7.57□□□□□ -1.2
IFT140Q96RY7 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC7.57□□□□□ -1.2
IFT140Q96RY7 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC7.57□□□□□ -1.2
IFT140Q96RY7 LDHAL6CP-202ENST00000550738 3224 ntBASIC7.57□□□□□ -1.2
IFT140Q96RY7 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
IFT140Q96RY7 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
IFT140Q96RY7 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
IFT140Q96RY7 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
IFT140Q96RY7 MT-RNR1-201ENST00000389680 954 ntBASIC7.56□□□□□ -1.2
IFT140Q96RY7 AC069157.1-201ENST00000421749 137 ntBASIC7.56□□□□□ -1.2
IFT140Q96RY7 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC7.56□□□□□ -1.2
IFT140Q96RY7 ARAFP2-201ENST00000440565 559 ntBASIC7.56□□□□□ -1.2
IFT140Q96RY7 RPL23AP43-201ENST00000446445 471 ntBASIC7.56□□□□□ -1.2
IFT140Q96RY7 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC7.56□□□□□ -1.2
IFT140Q96RY7 AC098799.3-201ENST00000506095 438 ntBASIC7.56□□□□□ -1.2
IFT140Q96RY7 AC016559.2-201ENST00000510759 359 ntBASIC7.56□□□□□ -1.2
IFT140Q96RY7 FKBP1BP1-201ENST00000553366 325 ntBASIC7.56□□□□□ -1.2
IFT140Q96RY7 AGGF1P9-201ENST00000561884 913 ntBASIC7.56□□□□□ -1.2
IFT140Q96RY7 AC025857.2-201ENST00000602711 238 ntBASIC7.56□□□□□ -1.2
IFT140Q96RY7 BNIP3P19-201ENST00000605397 577 ntBASIC7.56□□□□□ -1.2
IFT140Q96RY7 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
IFT140Q96RY7 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
IFT140Q96RY7 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC7.56□□□□□ -1.2
IFT140Q96RY7 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC7.56□□□□□ -1.2
IFT140Q96RY7 NLN-202ENST00000502464 8354 ntTSL 5 BASIC7.56□□□□□ -1.2
IFT140Q96RY7 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
IFT140Q96RY7 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
IFT140Q96RY7 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
IFT140Q96RY7 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
IFT140Q96RY7 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
IFT140Q96RY7 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC7.56□□□□□ -1.2
IFT140Q96RY7 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC7.56□□□□□ -1.2
IFT140Q96RY7 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
IFT140Q96RY7 AP000580.1-201ENST00000404439 358 ntBASIC7.55□□□□□ -1.2
IFT140Q96RY7 HYKK-202ENST00000408962 847 ntTSL 5 BASIC7.55□□□□□ -1.2
IFT140Q96RY7 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC7.55□□□□□ -1.2
IFT140Q96RY7 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC7.55□□□□□ -1.2
IFT140Q96RY7 AL162151.2-201ENST00000448875 158 ntBASIC7.55□□□□□ -1.2
IFT140Q96RY7 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC7.55□□□□□ -1.2
IFT140Q96RY7 AP001804.2-201ENST00000533932 910 ntBASIC7.55□□□□□ -1.2
IFT140Q96RY7 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC7.55□□□□□ -1.2
IFT140Q96RY7 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC7.55□□□□□ -1.2
IFT140Q96RY7 HYKK-203ENST00000563233 734 ntTSL 2 BASIC7.55□□□□□ -1.2
IFT140Q96RY7 PRPF19P1-201ENST00000584766 898 ntBASIC7.55□□□□□ -1.2
IFT140Q96RY7 AC112484.5-201ENST00000624189 228 ntBASIC7.55□□□□□ -1.2
IFT140Q96RY7 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7.55□□□□□ -1.2
IFT140Q96RY7 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC7.55□□□□□ -1.2
IFT140Q96RY7 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC7.55□□□□□ -1.2
IFT140Q96RY7 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
IFT140Q96RY7 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC7.55□□□□□ -1.2
IFT140Q96RY7 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
IFT140Q96RY7 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
IFT140Q96RY7 AC097374.1-203ENST00000400783 485 ntBASIC7.55□□□□□ -1.2
IFT140Q96RY7 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC7.55□□□□□ -1.2
IFT140Q96RY7 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC7.55□□□□□ -1.2
IFT140Q96RY7 MTCO1P54-201ENST00000430139 712 ntBASIC7.55□□□□□ -1.2
IFT140Q96RY7 BX276092.6-201ENST00000430476 250 ntBASIC7.55□□□□□ -1.2
IFT140Q96RY7 BX276092.8-201ENST00000455722 250 ntBASIC7.55□□□□□ -1.2
IFT140Q96RY7 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC7.55□□□□□ -1.2
IFT140Q96RY7 AC040958.1-201ENST00000561102 201 ntBASIC7.55□□□□□ -1.2
IFT140Q96RY7 MIR4298-201ENST00000584380 73 ntBASIC7.55□□□□□ -1.2
IFT140Q96RY7 AL356121.2-201ENST00000624715 780 ntBASIC7.55□□□□□ -1.2
IFT140Q96RY7 AC239868.2-201ENST00000564237 4527 ntBASIC7.55□□□□□ -1.2
IFT140Q96RY7 LINC00622-201ENST00000562811 1570 ntBASIC7.54□□□□□ -1.2
IFT140Q96RY7 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC7.54□□□□□ -1.2
IFT140Q96RY7 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
IFT140Q96RY7 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
IFT140Q96RY7 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
IFT140Q96RY7 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
IFT140Q96RY7 AL139039.2-201ENST00000407436 479 ntBASIC7.54□□□□□ -1.2
IFT140Q96RY7 YME1L1P1-201ENST00000429435 297 ntBASIC7.54□□□□□ -1.2
IFT140Q96RY7 AL050321.1-201ENST00000432363 400 ntBASIC7.54□□□□□ -1.2
IFT140Q96RY7 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC7.54□□□□□ -1.2
IFT140Q96RY7 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC7.54□□□□□ -1.2
IFT140Q96RY7 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms