Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.11□□□□□ -1.59
VMP1Q96GC9 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.11□□□□□ -1.59
VMP1Q96GC9 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.11□□□□□ -1.59
VMP1Q96GC9 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.11□□□□□ -1.59
VMP1Q96GC9 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.11□□□□□ -1.59
VMP1Q96GC9 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.11□□□□□ -1.59
VMP1Q96GC9 AC104307.1-201ENST00000616142 196 ntBASIC5.11□□□□□ -1.59
VMP1Q96GC9 MIR6837-201ENST00000620884 64 ntBASIC5.11□□□□□ -1.59
VMP1Q96GC9 AP003072.4-201ENST00000624580 310 ntBASIC5.11□□□□□ -1.59
VMP1Q96GC9 MIR6715B-201ENST00000637172 77 ntBASIC5.11□□□□□ -1.59
VMP1Q96GC9 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.11□□□□□ -1.59
VMP1Q96GC9 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
VMP1Q96GC9 AC022417.1-201ENST00000624768 1303 ntBASIC5.11□□□□□ -1.59
VMP1Q96GC9 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
VMP1Q96GC9 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VMP1Q96GC9 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
VMP1Q96GC9 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.11□□□□□ -1.59
VMP1Q96GC9 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
VMP1Q96GC9 AL353743.4-201ENST00000422653 1547 ntBASIC5.11□□□□□ -1.59
VMP1Q96GC9 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VMP1Q96GC9 AL445487.1-201ENST00000415694 1580 ntBASIC5.11□□□□□ -1.59
VMP1Q96GC9 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.11□□□□□ -1.59
VMP1Q96GC9 SMG1P4-204ENST00000523028 4131 ntBASIC5.11□□□□□ -1.59
VMP1Q96GC9 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
VMP1Q96GC9 AL133243.3-201ENST00000617415 3004 ntBASIC5.1□□□□□ -1.59
VMP1Q96GC9 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
VMP1Q96GC9 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
VMP1Q96GC9 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
VMP1Q96GC9 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
VMP1Q96GC9 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VMP1Q96GC9 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
VMP1Q96GC9 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VMP1Q96GC9 RPS24P12-201ENST00000402084 394 ntBASIC5.1□□□□□ -1.59
VMP1Q96GC9 AL359643.1-201ENST00000404109 423 ntBASIC5.1□□□□□ -1.59
VMP1Q96GC9 AL590290.1-201ENST00000405336 380 ntBASIC5.1□□□□□ -1.59
VMP1Q96GC9 MTND3P20-201ENST00000407663 186 ntBASIC5.1□□□□□ -1.59
VMP1Q96GC9 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.1□□□□□ -1.59
VMP1Q96GC9 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.1□□□□□ -1.59
VMP1Q96GC9 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VMP1Q96GC9 RWDD4P2-201ENST00000426392 563 ntBASIC5.1□□□□□ -1.59
VMP1Q96GC9 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.1□□□□□ -1.59
VMP1Q96GC9 FO393419.3-201ENST00000428741 282 ntBASIC5.1□□□□□ -1.59
VMP1Q96GC9 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.1□□□□□ -1.59
VMP1Q96GC9 CYCSP12-201ENST00000437729 300 ntBASIC5.1□□□□□ -1.59
VMP1Q96GC9 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.1□□□□□ -1.59
VMP1Q96GC9 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.1□□□□□ -1.59
VMP1Q96GC9 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.1□□□□□ -1.59
VMP1Q96GC9 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.1□□□□□ -1.59
VMP1Q96GC9 SUMO2P1-206ENST00000445436 284 ntBASIC5.1□□□□□ -1.59
VMP1Q96GC9 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.1□□□□□ -1.59
VMP1Q96GC9 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.1□□□□□ -1.59
VMP1Q96GC9 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.1□□□□□ -1.59
VMP1Q96GC9 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.1□□□□□ -1.59
VMP1Q96GC9 RWDD4P1-201ENST00000488019 565 ntBASIC5.1□□□□□ -1.59
VMP1Q96GC9 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.1□□□□□ -1.59
VMP1Q96GC9 MTND6P2-201ENST00000512226 524 ntBASIC5.1□□□□□ -1.59
VMP1Q96GC9 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VMP1Q96GC9 CIR1P2-201ENST00000514821 1342 ntBASIC5.1□□□□□ -1.59
VMP1Q96GC9 SCARNA21.2-201ENST00000516600 166 ntBASIC5.1□□□□□ -1.59
VMP1Q96GC9 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.1□□□□□ -1.59
VMP1Q96GC9 AC100784.1-201ENST00000522790 310 ntBASIC5.1□□□□□ -1.59
VMP1Q96GC9 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.1□□□□□ -1.59
VMP1Q96GC9 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.1□□□□□ -1.59
VMP1Q96GC9 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
VMP1Q96GC9 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.1□□□□□ -1.59
VMP1Q96GC9 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC5.1□□□□□ -1.59
VMP1Q96GC9 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
VMP1Q96GC9 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.1□□□□□ -1.59
VMP1Q96GC9 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.1□□□□□ -1.59
VMP1Q96GC9 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.1□□□□□ -1.59
VMP1Q96GC9 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.1□□□□□ -1.59
VMP1Q96GC9 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.1□□□□□ -1.59
VMP1Q96GC9 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.1□□□□□ -1.59
VMP1Q96GC9 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VMP1Q96GC9 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.1□□□□□ -1.59
VMP1Q96GC9 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.1□□□□□ -1.59
VMP1Q96GC9 AC073137.1-201ENST00000605636 634 ntBASIC5.1□□□□□ -1.59
VMP1Q96GC9 AC000068.2-201ENST00000608816 460 ntBASIC5.1□□□□□ -1.59
VMP1Q96GC9 AC024023.1-201ENST00000624530 922 ntBASIC5.1□□□□□ -1.59
VMP1Q96GC9 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.1□□□□□ -1.59
VMP1Q96GC9 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.1□□□□□ -1.59
VMP1Q96GC9 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.1□□□□□ -1.59
VMP1Q96GC9 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
VMP1Q96GC9 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
VMP1Q96GC9 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
VMP1Q96GC9 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
VMP1Q96GC9 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
VMP1Q96GC9 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.1□□□□□ -1.59
VMP1Q96GC9 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
VMP1Q96GC9 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VMP1Q96GC9 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VMP1Q96GC9 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.09□□□□□ -1.59
VMP1Q96GC9 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.09□□□□□ -1.59
VMP1Q96GC9 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VMP1Q96GC9 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
VMP1Q96GC9 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
VMP1Q96GC9 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VMP1Q96GC9 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
VMP1Q96GC9 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
VMP1Q96GC9 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms