Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 OR8B1P-202ENST00000641132 1178 ntBASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 AC010266.2-201ENST00000564741 3255 ntBASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 AC239868.2-201ENST00000564237 4527 ntBASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 GTF2H2B-203ENST00000508065 1432 ntBASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 ENSAP3-201ENST00000312710 333 ntBASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 OR5H2-201ENST00000355273 945 ntBASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 OR2AT2P-201ENST00000413438 905 ntBASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 TRGV6-201ENST00000417928 299 ntBASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 AC090960.1-201ENST00000421072 306 ntBASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 BX276092.6-201ENST00000430476 250 ntBASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 AL365396.1-201ENST00000430854 671 ntBASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 FMO7P-201ENST00000436045 768 ntBASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 OR6D1P-201ENST00000436165 939 ntBASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 EEF1B2P6-201ENST00000445713 673 ntBASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 AC007327.1-201ENST00000447461 264 ntBASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 MYO5BP2-201ENST00000449815 1277 ntBASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 ART2BP-201ENST00000453501 499 ntBASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 BX276092.8-201ENST00000455722 250 ntBASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 RN7SL72P-201ENST00000460697 269 ntBASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 AC107015.1-201ENST00000466902 747 ntBASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 AC112191.2-201ENST00000522428 333 ntBASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 AL049872.1-201ENST00000556323 322 ntBASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 MRPS21P7-201ENST00000566937 238 ntBASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 MIR4505-201ENST00000582238 73 ntBASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 AC010620.1-201ENST00000601088 1102 ntBASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 AL353778.1-201ENST00000603149 408 ntBASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 AL133507.1-201ENST00000605269 557 ntBASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 AC008115.3-201ENST00000614874 549 ntBASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 AC009090.3-201ENST00000616553 565 ntBASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 AC104446.1-201ENST00000613728 1321 ntBASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.18□□□□□ -1.58
CTHRC1Q96CG8 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 138.1 ms