Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 AC091390.3-201ENST00000426478 338 ntBASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 H2AFZP5-201ENST00000446960 382 ntBASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 SETP4-201ENST00000455717 868 ntBASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 SNORA74C-1-201ENST00000580726 201 ntBASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 AL356863.1-201ENST00000623378 1080 ntBASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 LARP1BP1-201ENST00000506036 1359 ntBASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 CARF-203ENST00000414439 2099 ntTSL 2 BASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 MIR449B-201ENST00000384995 97 ntBASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 AC097374.1-203ENST00000400783 485 ntBASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 AC017019.1-201ENST00000426129 261 ntBASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 MTCO1P54-201ENST00000430139 712 ntBASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 AC006326.1-201ENST00000445465 787 ntBASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 DHFRP3-201ENST00000455595 559 ntBASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 CCNG2P1-201ENST00000549521 1000 ntBASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 AC090515.3-201ENST00000560431 315 ntBASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 AC018695.5-201ENST00000605872 315 ntBASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 AC007618.1-201ENST00000366455 732 ntBASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 AP000580.1-201ENST00000404439 358 ntBASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 VN1R37P-201ENST00000419096 748 ntBASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 AL445584.1-201ENST00000431451 330 ntBASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 BX842559.2-201ENST00000451418 605 ntBASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 snoU13.24-201ENST00000458998 104 ntBASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 AC111000.6-201ENST00000514471 709 ntBASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 RNA5SP360-201ENST00000516555 118 ntBASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 AC017100.2-201ENST00000584628 355 ntBASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 AL627171.1-201ENST00000618845 1308 ntBASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 AC025574.1-201ENST00000554784 1653 ntBASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 RNU1-132P-201ENST00000364300 164 ntBASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 AC018644.1-201ENST00000429934 551 ntBASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 AK4P6-201ENST00000505168 528 ntBASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 AC005618.4-201ENST00000625053 554 ntBASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 AC019072.1-201ENST00000604535 1551 ntBASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 ADAM5-202ENST00000399789 1942 ntBASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 YES1-203ENST00000577961 4554 ntTSL 5 BASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 RNA5SP124-201ENST00000362739 110 ntBASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 RNA5SP366-201ENST00000365454 123 ntBASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 AL359265.1-201ENST00000440296 795 ntBASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 RPL7L1P8-201ENST00000469911 741 ntBASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 MIR2116-201ENST00000517221 80 ntBASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 NELL2-211ENST00000548826 559 ntTSL 2 BASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 MIR6867-201ENST00000610636 67 ntBASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 ACTR3BP5-201ENST00000448440 1479 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms