Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 PFKM-232ENST00000629846 381 ntTSL 4 BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 SPRR5-201ENST00000636302 817 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
DEPDC4Q8N2C3 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 PYHIN1-202ENST00000368138 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 AL645937.1-201ENST00000641739 1652 ntBASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 FER-202ENST00000438717 1531 ntTSL 2 BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 TUBBP10-201ENST00000427668 1301 ntBASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 CORIN-207ENST00000505909 3018 ntTSL 5 BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 IFT22-201ENST00000315322 1130 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 OR10J3-201ENST00000332217 990 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 SNORA69-201ENST00000383895 132 ntBASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 RNU6-456P-201ENST00000384493 107 ntBASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 MIR640-201ENST00000385086 96 ntBASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 RPL12P9-201ENST00000412942 488 ntBASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 RPL36P18-201ENST00000419316 318 ntBASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 AL590714.1-201ENST00000420498 379 ntTSL 3 BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 AC008753.1-201ENST00000423096 284 ntBASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 AL354983.1-201ENST00000434580 906 ntBASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 PPIAP13-201ENST00000434706 478 ntBASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 LINC00460-201ENST00000435024 631 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 AC023274.2-201ENST00000445264 521 ntBASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 AC002381.1-201ENST00000447049 280 ntBASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 PABPC1P3-201ENST00000469174 459 ntBASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 AP001025.2-201ENST00000490908 477 ntBASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 AC021491.1-201ENST00000502300 349 ntTSL 5 BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 AP003072.1-201ENST00000531740 145 ntBASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 CRTC3-AS1-201ENST00000558105 502 ntTSL 5 BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 AC090515.3-201ENST00000560431 315 ntBASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 AC138749.2-201ENST00000566048 167 ntBASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 MIR3167-201ENST00000579623 85 ntBASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 BBIP1P1-201ENST00000602999 279 ntBASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 AL137190.1-201ENST00000603288 282 ntBASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 OR10AB1P-201ENST00000609613 938 ntBASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 AC009237.17-201ENST00000618111 748 ntBASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 AC002550.2-201ENST00000621246 394 ntBASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 AC012557.3-201ENST00000626439 255 ntBASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 AC004158.1-201ENST00000564508 4319 ntBASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 TROVE2-201ENST00000367441 1791 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
DEPDC4Q8N2C3 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms