Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
LRRC28Q86X40 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.25□□□□□ -1.73
LRRC28Q86X40 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LRRC28Q86X40 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LRRC28Q86X40 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
LRRC28Q86X40 AL109941.1-201ENST00000401925 229 ntBASIC4.25□□□□□ -1.73
LRRC28Q86X40 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LRRC28Q86X40 AL121834.1-202ENST00000404494 277 ntBASIC4.25□□□□□ -1.73
LRRC28Q86X40 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LRRC28Q86X40 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.25□□□□□ -1.73
LRRC28Q86X40 AL445487.1-201ENST00000415694 1580 ntBASIC4.25□□□□□ -1.73
LRRC28Q86X40 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC4.25□□□□□ -1.73
LRRC28Q86X40 OR2X1P-201ENST00000421144 687 ntBASIC4.25□□□□□ -1.73
LRRC28Q86X40 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.25□□□□□ -1.73
LRRC28Q86X40 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.25□□□□□ -1.73
LRRC28Q86X40 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.25□□□□□ -1.73
LRRC28Q86X40 RPL12P3-201ENST00000440080 396 ntBASIC4.25□□□□□ -1.73
LRRC28Q86X40 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC4.25□□□□□ -1.73
LRRC28Q86X40 AL354714.3-201ENST00000447284 493 ntBASIC4.25□□□□□ -1.73
LRRC28Q86X40 PTMAP3-201ENST00000447474 330 ntBASIC4.25□□□□□ -1.73
LRRC28Q86X40 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.25□□□□□ -1.73
LRRC28Q86X40 AC108022.1-201ENST00000493466 478 ntBASIC4.25□□□□□ -1.73
LRRC28Q86X40 AC026688.1-201ENST00000520639 1168 ntBASIC4.25□□□□□ -1.73
LRRC28Q86X40 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LRRC28Q86X40 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.25□□□□□ -1.73
LRRC28Q86X40 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.25□□□□□ -1.73
LRRC28Q86X40 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC4.25□□□□□ -1.73
LRRC28Q86X40 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.25□□□□□ -1.73
LRRC28Q86X40 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.25□□□□□ -1.73
LRRC28Q86X40 MIR4691-201ENST00000583764 85 ntBASIC4.25□□□□□ -1.73
LRRC28Q86X40 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.25□□□□□ -1.73
LRRC28Q86X40 AC011487.3-201ENST00000593607 453 ntBASIC4.25□□□□□ -1.73
LRRC28Q86X40 AC008536.1-201ENST00000602872 669 ntBASIC4.25□□□□□ -1.73
LRRC28Q86X40 AC105254.2-201ENST00000603636 436 ntBASIC4.25□□□□□ -1.73
LRRC28Q86X40 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.25□□□□□ -1.73
LRRC28Q86X40 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LRRC28Q86X40 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.25□□□□□ -1.73
LRRC28Q86X40 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.25□□□□□ -1.73
LRRC28Q86X40 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.25□□□□□ -1.73
LRRC28Q86X40 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.25□□□□□ -1.73
LRRC28Q86X40 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LRRC28Q86X40 INTS6P1-201ENST00000504674 2530 ntBASIC4.25□□□□□ -1.73
LRRC28Q86X40 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.25□□□□□ -1.73
LRRC28Q86X40 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
LRRC28Q86X40 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LRRC28Q86X40 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LRRC28Q86X40 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.24□□□□□ -1.73
LRRC28Q86X40 HCFC2P1-201ENST00000392864 1592 ntBASIC4.24□□□□□ -1.73
LRRC28Q86X40 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
LRRC28Q86X40 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LRRC28Q86X40 RNA5SP123-201ENST00000363244 119 ntBASIC4.24□□□□□ -1.73
LRRC28Q86X40 SNORA70.10-201ENST00000384515 134 ntBASIC4.24□□□□□ -1.73
LRRC28Q86X40 MIR550A3-201ENST00000390735 95 ntBASIC4.24□□□□□ -1.73
LRRC28Q86X40 AL133270.1-201ENST00000402635 279 ntBASIC4.24□□□□□ -1.73
LRRC28Q86X40 AL080315.1-201ENST00000406055 466 ntBASIC4.24□□□□□ -1.73
LRRC28Q86X40 SNORA11B-201ENST00000408175 129 ntBASIC4.24□□□□□ -1.73
LRRC28Q86X40 BX323845.1-201ENST00000432417 179 ntBASIC4.24□□□□□ -1.73
LRRC28Q86X40 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.24□□□□□ -1.73
LRRC28Q86X40 RPL34P20-201ENST00000442771 351 ntBASIC4.24□□□□□ -1.73
LRRC28Q86X40 OR7E125P-201ENST00000443450 846 ntBASIC4.24□□□□□ -1.73
LRRC28Q86X40 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LRRC28Q86X40 RPL37AP8-201ENST00000494116 276 ntBASIC4.24□□□□□ -1.73
LRRC28Q86X40 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.24□□□□□ -1.73
LRRC28Q86X40 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
LRRC28Q86X40 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.24□□□□□ -1.73
LRRC28Q86X40 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.24□□□□□ -1.73
LRRC28Q86X40 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.24□□□□□ -1.73
LRRC28Q86X40 OR5AZ1P-201ENST00000527448 943 ntBASIC4.24□□□□□ -1.73
LRRC28Q86X40 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.24□□□□□ -1.73
LRRC28Q86X40 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.24□□□□□ -1.73
LRRC28Q86X40 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.24□□□□□ -1.73
LRRC28Q86X40 AL627230.1-201ENST00000613077 211 ntBASIC4.24□□□□□ -1.73
LRRC28Q86X40 AL591926.8-201ENST00000616876 211 ntBASIC4.24□□□□□ -1.73
LRRC28Q86X40 AC112694.2-201ENST00000623697 768 ntBASIC4.24□□□□□ -1.73
LRRC28Q86X40 AL353662.3-201ENST00000625131 237 ntBASIC4.24□□□□□ -1.73
LRRC28Q86X40 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
LRRC28Q86X40 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.24□□□□□ -1.73
LRRC28Q86X40 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
LRRC28Q86X40 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.24□□□□□ -1.73
LRRC28Q86X40 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
LRRC28Q86X40 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
LRRC28Q86X40 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
LRRC28Q86X40 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LRRC28Q86X40 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LRRC28Q86X40 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.23□□□□□ -1.73
LRRC28Q86X40 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.23□□□□□ -1.73
LRRC28Q86X40 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.23□□□□□ -1.73
LRRC28Q86X40 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
LRRC28Q86X40 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
LRRC28Q86X40 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
LRRC28Q86X40 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
LRRC28Q86X40 RNA5SP428-201ENST00000365129 132 ntBASIC4.23□□□□□ -1.73
LRRC28Q86X40 AC073136.2-201ENST00000417282 849 ntBASIC4.23□□□□□ -1.73
LRRC28Q86X40 OR2AM1P-201ENST00000422137 422 ntBASIC4.23□□□□□ -1.73
LRRC28Q86X40 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.23□□□□□ -1.73
LRRC28Q86X40 AC093414.1-201ENST00000434712 514 ntBASIC4.23□□□□□ -1.73
LRRC28Q86X40 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.23□□□□□ -1.73
LRRC28Q86X40 SCAND3P1-201ENST00000439854 1060 ntBASIC4.23□□□□□ -1.73
LRRC28Q86X40 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.23□□□□□ -1.73
LRRC28Q86X40 TRY2P-201ENST00000448860 689 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms