Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AC068714.1-201ENST00000559623 800 ntBASIC3.32□□□□□ -1.88
SCXQ7RTU7 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SCXQ7RTU7 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.32□□□□□ -1.88
SCXQ7RTU7 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.32□□□□□ -1.88
SCXQ7RTU7 AC034236.3-201ENST00000605999 461 ntBASIC3.32□□□□□ -1.88
SCXQ7RTU7 FAM25E-202ENST00000608562 189 ntBASIC3.32□□□□□ -1.88
SCXQ7RTU7 AC093799.2-201ENST00000610062 578 ntBASIC3.32□□□□□ -1.88
SCXQ7RTU7 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.32□□□□□ -1.88
SCXQ7RTU7 AL023881.1-201ENST00000621088 301 ntBASIC3.32□□□□□ -1.88
SCXQ7RTU7 uc_338.7-201ENST00000621834 124 ntBASIC3.32□□□□□ -1.88
SCXQ7RTU7 AC105105.5-201ENST00000622635 1294 ntBASIC3.32□□□□□ -1.88
SCXQ7RTU7 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC3.32□□□□□ -1.88
SCXQ7RTU7 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
SCXQ7RTU7 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.32□□□□□ -1.88
SCXQ7RTU7 AC135068.12-201ENST00000637370 931 ntBASIC3.32□□□□□ -1.88
SCXQ7RTU7 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
SCXQ7RTU7 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
SCXQ7RTU7 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SCXQ7RTU7 CYP1D1P-201ENST00000416662 1433 ntBASIC3.32□□□□□ -1.88
SCXQ7RTU7 VN2R3P-201ENST00000422626 1412 ntBASIC3.32□□□□□ -1.88
SCXQ7RTU7 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SCXQ7RTU7 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SCXQ7RTU7 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC3.32□□□□□ -1.88
SCXQ7RTU7 AC074029.4-201ENST00000624796 1859 ntBASIC3.32□□□□□ -1.88
SCXQ7RTU7 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SCXQ7RTU7 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SCXQ7RTU7 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SCXQ7RTU7 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.32□□□□□ -1.88
SCXQ7RTU7 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SCXQ7RTU7 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SCXQ7RTU7 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
SCXQ7RTU7 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SCXQ7RTU7 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SCXQ7RTU7 LINC01109-201ENST00000603837 3081 ntBASIC3.31□□□□□ -1.88
SCXQ7RTU7 THAP12P4-201ENST00000528321 2266 ntBASIC3.31□□□□□ -1.88
SCXQ7RTU7 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SCXQ7RTU7 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.31□□□□□ -1.88
SCXQ7RTU7 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
SCXQ7RTU7 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
SCXQ7RTU7 Z95327.2-201ENST00000414579 1873 ntBASIC3.31□□□□□ -1.88
SCXQ7RTU7 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SCXQ7RTU7 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC3.31□□□□□ -1.88
SCXQ7RTU7 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SCXQ7RTU7 U3.3-201ENST00000362986 216 ntBASIC3.31□□□□□ -1.88
SCXQ7RTU7 RNA5SP123-201ENST00000363244 119 ntBASIC3.31□□□□□ -1.88
SCXQ7RTU7 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SCXQ7RTU7 SNORA51.8-201ENST00000384234 132 ntBASIC3.31□□□□□ -1.88
SCXQ7RTU7 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SCXQ7RTU7 AL034403.1-201ENST00000399414 885 ntBASIC3.31□□□□□ -1.88
SCXQ7RTU7 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC3.31□□□□□ -1.88
SCXQ7RTU7 MIR1271-201ENST00000408537 86 ntBASIC3.31□□□□□ -1.88
SCXQ7RTU7 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.31□□□□□ -1.88
SCXQ7RTU7 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC3.31□□□□□ -1.88
SCXQ7RTU7 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC3.31□□□□□ -1.88
SCXQ7RTU7 DDX39BP1-205ENST00000422507 192 ntBASIC3.31□□□□□ -1.88
SCXQ7RTU7 AC104333.2-201ENST00000422630 192 ntBASIC3.31□□□□□ -1.88
SCXQ7RTU7 AC104837.2-201ENST00000427236 424 ntBASIC3.31□□□□□ -1.88
SCXQ7RTU7 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.31□□□□□ -1.88
SCXQ7RTU7 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC3.31□□□□□ -1.88
SCXQ7RTU7 OR6C71P-201ENST00000432580 913 ntBASIC3.31□□□□□ -1.88
SCXQ7RTU7 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC3.31□□□□□ -1.88
SCXQ7RTU7 RPS29P10-201ENST00000439197 166 ntBASIC3.31□□□□□ -1.88
SCXQ7RTU7 AC073648.4-201ENST00000442655 781 ntBASIC3.31□□□□□ -1.88
SCXQ7RTU7 RAB28P3-201ENST00000448325 597 ntBASIC3.31□□□□□ -1.88
SCXQ7RTU7 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SCXQ7RTU7 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC3.31□□□□□ -1.88
SCXQ7RTU7 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC3.31□□□□□ -1.88
SCXQ7RTU7 AC016559.2-201ENST00000510759 359 ntBASIC3.31□□□□□ -1.88
SCXQ7RTU7 SNORD116-30-201ENST00000516468 85 ntBASIC3.31□□□□□ -1.88
SCXQ7RTU7 RNU6-347P-201ENST00000516658 105 ntBASIC3.31□□□□□ -1.88
SCXQ7RTU7 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC3.31□□□□□ -1.88
SCXQ7RTU7 VTA1P2-201ENST00000520205 911 ntBASIC3.31□□□□□ -1.88
SCXQ7RTU7 HNRNPRP2-201ENST00000528421 743 ntBASIC3.31□□□□□ -1.88
SCXQ7RTU7 BRD9P1-201ENST00000529855 560 ntBASIC3.31□□□□□ -1.88
SCXQ7RTU7 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC3.31□□□□□ -1.88
SCXQ7RTU7 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC3.31□□□□□ -1.88
SCXQ7RTU7 AC005000.1-201ENST00000536192 288 ntBASIC3.31□□□□□ -1.88
SCXQ7RTU7 PCNPP1-201ENST00000552501 511 ntBASIC3.31□□□□□ -1.88
SCXQ7RTU7 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC3.31□□□□□ -1.88
SCXQ7RTU7 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC3.31□□□□□ -1.88
SCXQ7RTU7 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC3.31□□□□□ -1.88
SCXQ7RTU7 MIR4480-201ENST00000582492 71 ntBASIC3.31□□□□□ -1.88
SCXQ7RTU7 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC3.31□□□□□ -1.88
SCXQ7RTU7 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.31□□□□□ -1.88
SCXQ7RTU7 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC3.31□□□□□ -1.88
SCXQ7RTU7 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC3.31□□□□□ -1.88
SCXQ7RTU7 AC244107.2-201ENST00000611773 76 ntBASIC3.31□□□□□ -1.88
SCXQ7RTU7 AC116447.1-201ENST00000613153 453 ntBASIC3.31□□□□□ -1.88
SCXQ7RTU7 AC244517.3-201ENST00000616254 1235 ntBASIC3.31□□□□□ -1.88
SCXQ7RTU7 LINC00901.1-201ENST00000617252 152 ntBASIC3.31□□□□□ -1.88
SCXQ7RTU7 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC3.31□□□□□ -1.88
SCXQ7RTU7 AC091953.3-201ENST00000623220 236 ntBASIC3.31□□□□□ -1.88
SCXQ7RTU7 AC015871.5-202ENST00000623252 701 ntBASIC3.31□□□□□ -1.88
SCXQ7RTU7 AC091905.4-201ENST00000623432 202 ntBASIC3.31□□□□□ -1.88
SCXQ7RTU7 AC087821.1-201ENST00000623639 567 ntBASIC3.31□□□□□ -1.88
SCXQ7RTU7 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC3.31□□□□□ -1.88
SCXQ7RTU7 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
SCXQ7RTU7 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SCXQ7RTU7 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SCXQ7RTU7 PHKBP1-201ENST00000450951 1951 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms