Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AL035079.1-201ENST00000405210 287 ntBASIC3.63□□□□□ -1.83
VPS13CQ709C8 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.63□□□□□ -1.83
VPS13CQ709C8 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VPS13CQ709C8 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
VPS13CQ709C8 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.63□□□□□ -1.83
VPS13CQ709C8 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VPS13CQ709C8 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VPS13CQ709C8 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC3.63□□□□□ -1.83
VPS13CQ709C8 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
VPS13CQ709C8 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VPS13CQ709C8 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
VPS13CQ709C8 ADGRB3-202ENST00000370598 6010 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VPS13CQ709C8 AC006042.3-201ENST00000454684 1469 ntBASIC3.63□□□□□ -1.83
VPS13CQ709C8 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
VPS13CQ709C8 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC3.63□□□□□ -1.83
VPS13CQ709C8 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC3.63□□□□□ -1.83
VPS13CQ709C8 NLN-202ENST00000502464 8354 ntTSL 5 BASIC3.63□□□□□ -1.83
VPS13CQ709C8 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC3.63□□□□□ -1.83
VPS13CQ709C8 PPIAP13-201ENST00000434706 478 ntBASIC3.63□□□□□ -1.83
VPS13CQ709C8 UBE2V1P3-201ENST00000439651 417 ntBASIC3.63□□□□□ -1.83
VPS13CQ709C8 RN7SL197P-201ENST00000466981 299 ntBASIC3.63□□□□□ -1.83
VPS13CQ709C8 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VPS13CQ709C8 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC3.63□□□□□ -1.83
VPS13CQ709C8 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VPS13CQ709C8 AC025857.2-201ENST00000602711 238 ntBASIC3.63□□□□□ -1.83
VPS13CQ709C8 AC007546.1-201ENST00000619452 559 ntBASIC3.63□□□□□ -1.83
VPS13CQ709C8 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VPS13CQ709C8 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VPS13CQ709C8 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VPS13CQ709C8 VLDLR-203ENST00000382100 9163 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
VPS13CQ709C8 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VPS13CQ709C8 LINC00622-201ENST00000562811 1570 ntBASIC3.63□□□□□ -1.83
VPS13CQ709C8 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VPS13CQ709C8 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC3.62□□□□□ -1.83
VPS13CQ709C8 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
VPS13CQ709C8 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VPS13CQ709C8 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
VPS13CQ709C8 MGP-201ENST00000228938 694 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS13CQ709C8 MIR218-2-201ENST00000385006 110 ntBASIC3.62□□□□□ -1.83
VPS13CQ709C8 RNU6ATAC-201ENST00000408749 126 ntBASIC3.62□□□□□ -1.83
VPS13CQ709C8 RPS20P14-201ENST00000412545 360 ntBASIC3.62□□□□□ -1.83
VPS13CQ709C8 COX6B1P7-201ENST00000430845 235 ntBASIC3.62□□□□□ -1.83
VPS13CQ709C8 RPL7P33-201ENST00000444159 742 ntBASIC3.62□□□□□ -1.83
VPS13CQ709C8 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS13CQ709C8 AC146944.2-203ENST00000502493 354 ntBASIC3.62□□□□□ -1.83
VPS13CQ709C8 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS13CQ709C8 AC139495.1-202ENST00000513164 354 ntBASIC3.62□□□□□ -1.83
VPS13CQ709C8 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS13CQ709C8 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS13CQ709C8 DYNLL1P4-201ENST00000549314 266 ntBASIC3.62□□□□□ -1.83
VPS13CQ709C8 FCF1-203ENST00000553615 954 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS13CQ709C8 TVP23BP1-201ENST00000557500 617 ntBASIC3.62□□□□□ -1.83
VPS13CQ709C8 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS13CQ709C8 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC3.62□□□□□ -1.83
VPS13CQ709C8 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
VPS13CQ709C8 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
VPS13CQ709C8 POLR3A-201ENST00000372371 6640 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VPS13CQ709C8 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
VPS13CQ709C8 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
VPS13CQ709C8 ALB-202ENST00000401494 1659 ntTSL 5 BASIC3.62□□□□□ -1.83
VPS13CQ709C8 EIF2AP4-201ENST00000424793 1781 ntBASIC3.62□□□□□ -1.83
VPS13CQ709C8 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VPS13CQ709C8 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS13CQ709C8 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
VPS13CQ709C8 AC007068.1-201ENST00000396690 844 ntBASIC3.62□□□□□ -1.83
VPS13CQ709C8 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.62□□□□□ -1.83
VPS13CQ709C8 AL691449.1-201ENST00000426570 421 ntBASIC3.62□□□□□ -1.83
VPS13CQ709C8 RPL35P6-201ENST00000490024 372 ntBASIC3.62□□□□□ -1.83
VPS13CQ709C8 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS13CQ709C8 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS13CQ709C8 HSPE1P5-201ENST00000561489 272 ntBASIC3.62□□□□□ -1.83
VPS13CQ709C8 AGGF1P9-201ENST00000561884 913 ntBASIC3.62□□□□□ -1.83
VPS13CQ709C8 AC023762.1-201ENST00000603280 584 ntBASIC3.62□□□□□ -1.83
VPS13CQ709C8 AC024023.1-201ENST00000624530 922 ntBASIC3.62□□□□□ -1.83
VPS13CQ709C8 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC3.62□□□□□ -1.83
VPS13CQ709C8 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
VPS13CQ709C8 U6.105-201ENST00000637379 88 ntBASIC3.62□□□□□ -1.83
VPS13CQ709C8 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.62□□□□□ -1.83
VPS13CQ709C8 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS13CQ709C8 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VPS13CQ709C8 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
VPS13CQ709C8 CASC19-206ENST00000641028 1430 ntBASIC3.62□□□□□ -1.83
VPS13CQ709C8 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC3.62□□□□□ -1.83
VPS13CQ709C8 BMPR1A-201ENST00000372037 11255 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VPS13CQ709C8 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC3.62□□□□□ -1.83
VPS13CQ709C8 AC140134.1-201ENST00000511830 3544 ntBASIC3.62□□□□□ -1.83
VPS13CQ709C8 EYA4-201ENST00000355167 5692 ntTSL 5 BASIC3.62□□□□□ -1.83
VPS13CQ709C8 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
VPS13CQ709C8 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC3.62□□□□□ -1.83
VPS13CQ709C8 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
VPS13CQ709C8 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VPS13CQ709C8 AC008033.1-201ENST00000216407 1162 ntBASIC3.62□□□□□ -1.83
VPS13CQ709C8 AL035696.2-201ENST00000407941 709 ntBASIC3.62□□□□□ -1.83
VPS13CQ709C8 AC013429.2-201ENST00000418798 781 ntBASIC3.62□□□□□ -1.83
VPS13CQ709C8 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS13CQ709C8 ABCF2P2-201ENST00000450549 296 ntBASIC3.62□□□□□ -1.83
VPS13CQ709C8 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VPS13CQ709C8 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS13CQ709C8 GMPSP1-201ENST00000514075 579 ntBASIC3.62□□□□□ -1.83
VPS13CQ709C8 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms