Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.58□□□□□ -1.68
TMEM53Q6P2H8 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.58□□□□□ -1.68
TMEM53Q6P2H8 MIR3176-201ENST00000582210 90 ntBASIC4.58□□□□□ -1.68
TMEM53Q6P2H8 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.58□□□□□ -1.68
TMEM53Q6P2H8 SNX6P1-201ENST00000601728 1224 ntBASIC4.58□□□□□ -1.68
TMEM53Q6P2H8 AL139395.1-201ENST00000603662 160 ntBASIC4.58□□□□□ -1.68
TMEM53Q6P2H8 AC011626.1-201ENST00000604710 562 ntBASIC4.58□□□□□ -1.68
TMEM53Q6P2H8 IMMP1LP1-201ENST00000605170 488 ntBASIC4.58□□□□□ -1.68
TMEM53Q6P2H8 AC078899.5-201ENST00000612475 178 ntBASIC4.58□□□□□ -1.68
TMEM53Q6P2H8 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.58□□□□□ -1.68
TMEM53Q6P2H8 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.58□□□□□ -1.68
TMEM53Q6P2H8 MIR6826-201ENST00000617808 98 ntBASIC4.58□□□□□ -1.68
TMEM53Q6P2H8 MIR6729-201ENST00000618194 65 ntBASIC4.58□□□□□ -1.68
TMEM53Q6P2H8 MIR6839-201ENST00000620425 113 ntBASIC4.58□□□□□ -1.68
TMEM53Q6P2H8 AC105105.5-201ENST00000622635 1294 ntBASIC4.58□□□□□ -1.68
TMEM53Q6P2H8 AC004808.2-201ENST00000627965 773 ntBASIC4.58□□□□□ -1.68
TMEM53Q6P2H8 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.58□□□□□ -1.68
TMEM53Q6P2H8 Z73965.1-201ENST00000623412 2297 ntBASIC4.58□□□□□ -1.68
TMEM53Q6P2H8 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
TMEM53Q6P2H8 PNPT1P2-201ENST00000456768 2050 ntBASIC4.58□□□□□ -1.68
TMEM53Q6P2H8 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.58□□□□□ -1.68
TMEM53Q6P2H8 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
TMEM53Q6P2H8 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.58□□□□□ -1.68
TMEM53Q6P2H8 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TMEM53Q6P2H8 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.58□□□□□ -1.68
TMEM53Q6P2H8 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 IQCB2P-201ENST00000401788 1633 ntBASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 AC011493.1-201ENST00000596753 1632 ntBASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 AL672167.1-203ENST00000641299 2975 ntBASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 RNA5SP90-201ENST00000364801 99 ntBASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 FHP1-201ENST00000442741 703 ntBASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 CASP3P1-201ENST00000446037 609 ntBASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 RN7SL814P-201ENST00000487715 300 ntBASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 PGAM1P13-201ENST00000507497 754 ntBASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 RNU6-319P-201ENST00000516025 108 ntBASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 RNA5SP154-201ENST00000516193 111 ntBASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 VTA1P2-201ENST00000520205 911 ntBASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 AC090819.1-201ENST00000523800 1111 ntBASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 SUMO2P15-201ENST00000604285 278 ntBASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 AC007620.3-201ENST00000608131 497 ntBASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 MIR6862-1-201ENST00000613016 70 ntBASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 MIR6862-2-201ENST00000614755 70 ntBASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 AP002505.2-201ENST00000623585 696 ntBASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 MIR6715B-201ENST00000637172 77 ntBASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 ZNF733P-202ENST00000444809 1573 ntBASIC4.57□□□□□ -1.68
TMEM53Q6P2H8 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
TMEM53Q6P2H8 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TMEM53Q6P2H8 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TMEM53Q6P2H8 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
TMEM53Q6P2H8 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TMEM53Q6P2H8 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
TMEM53Q6P2H8 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
TMEM53Q6P2H8 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TMEM53Q6P2H8 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
TMEM53Q6P2H8 RNU1-108P-201ENST00000362556 161 ntBASIC4.56□□□□□ -1.68
TMEM53Q6P2H8 SNORA51.1-201ENST00000363243 140 ntBASIC4.56□□□□□ -1.68
TMEM53Q6P2H8 RNU1-43P-201ENST00000365052 165 ntBASIC4.56□□□□□ -1.68
TMEM53Q6P2H8 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
TMEM53Q6P2H8 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TMEM53Q6P2H8 MIR223-201ENST00000385204 110 ntBASIC4.56□□□□□ -1.68
TMEM53Q6P2H8 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms