Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 RWDD4P2-201ENST00000426392 563 ntBASIC4.27□□□□□ -1.73
CCDC58Q4VC31 BX119904.1-201ENST00000432026 348 ntBASIC4.27□□□□□ -1.73
CCDC58Q4VC31 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC58Q4VC31 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
CCDC58Q4VC31 RWDD4P1-201ENST00000488019 565 ntBASIC4.27□□□□□ -1.73
CCDC58Q4VC31 AK6-203ENST00000502819 743 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC58Q4VC31 COX6B1P5-201ENST00000509843 249 ntBASIC4.27□□□□□ -1.73
CCDC58Q4VC31 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC4.27□□□□□ -1.73
CCDC58Q4VC31 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC58Q4VC31 CYCSP28-201ENST00000534284 321 ntBASIC4.27□□□□□ -1.73
CCDC58Q4VC31 RBM7-208ENST00000545678 867 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC58Q4VC31 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.27□□□□□ -1.73
CCDC58Q4VC31 AC068446.3-201ENST00000555285 382 ntBASIC4.27□□□□□ -1.73
CCDC58Q4VC31 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.27□□□□□ -1.73
CCDC58Q4VC31 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC58Q4VC31 OR1AB1P-201ENST00000585564 761 ntBASIC4.27□□□□□ -1.73
CCDC58Q4VC31 AL359513.1-201ENST00000614364 557 ntBASIC4.27□□□□□ -1.73
CCDC58Q4VC31 AC007204.2-201ENST00000615022 616 ntBASIC4.27□□□□□ -1.73
CCDC58Q4VC31 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC58Q4VC31 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC58Q4VC31 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC58Q4VC31 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC58Q4VC31 AL031985.3-201ENST00000565390 2449 ntBASIC4.27□□□□□ -1.73
CCDC58Q4VC31 AC093311.1-201ENST00000506586 2021 ntBASIC4.27□□□□□ -1.73
CCDC58Q4VC31 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC58Q4VC31 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC58Q4VC31 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CCDC58Q4VC31 NR1H5P-201ENST00000452683 1377 ntBASIC4.27□□□□□ -1.73
CCDC58Q4VC31 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC58Q4VC31 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC58Q4VC31 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC58Q4VC31 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CCDC58Q4VC31 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
CCDC58Q4VC31 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC58Q4VC31 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.26□□□□□ -1.73
CCDC58Q4VC31 NXF4-202ENST00000416098 1465 ntBASIC4.26□□□□□ -1.73
CCDC58Q4VC31 AC011493.1-201ENST00000596753 1632 ntBASIC4.26□□□□□ -1.73
CCDC58Q4VC31 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC58Q4VC31 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
CCDC58Q4VC31 OR56B2P-201ENST00000317102 954 ntBASIC4.26□□□□□ -1.73
CCDC58Q4VC31 AL080315.1-201ENST00000406055 466 ntBASIC4.26□□□□□ -1.73
CCDC58Q4VC31 IPPKP1-201ENST00000422501 768 ntBASIC4.26□□□□□ -1.73
CCDC58Q4VC31 NANOGP6-201ENST00000429190 847 ntBASIC4.26□□□□□ -1.73
CCDC58Q4VC31 RPL7L1P9-201ENST00000431298 745 ntBASIC4.26□□□□□ -1.73
CCDC58Q4VC31 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.26□□□□□ -1.73
CCDC58Q4VC31 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC58Q4VC31 AL161636.2-201ENST00000445179 927 ntBASIC4.26□□□□□ -1.73
CCDC58Q4VC31 EEF1A1P1-201ENST00000447052 739 ntBASIC4.26□□□□□ -1.73
CCDC58Q4VC31 AC000111.2-201ENST00000448200 210 ntBASIC4.26□□□□□ -1.73
CCDC58Q4VC31 MTND4LP12-201ENST00000448237 295 ntBASIC4.26□□□□□ -1.73
CCDC58Q4VC31 RPL7P39-201ENST00000481157 744 ntBASIC4.26□□□□□ -1.73
CCDC58Q4VC31 RN7SL184P-201ENST00000488308 297 ntBASIC4.26□□□□□ -1.73
CCDC58Q4VC31 RN7SL244P-201ENST00000493405 297 ntBASIC4.26□□□□□ -1.73
CCDC58Q4VC31 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC58Q4VC31 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.26□□□□□ -1.73
CCDC58Q4VC31 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CCDC58Q4VC31 DEFB109D-201ENST00000529497 240 ntBASIC4.26□□□□□ -1.73
CCDC58Q4VC31 AC005363.1-201ENST00000530779 351 ntBASIC4.26□□□□□ -1.73
CCDC58Q4VC31 OR7E128P-201ENST00000532736 1024 ntBASIC4.26□□□□□ -1.73
CCDC58Q4VC31 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CCDC58Q4VC31 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC58Q4VC31 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC58Q4VC31 AP000919.1-201ENST00000582850 985 ntBASIC4.26□□□□□ -1.73
CCDC58Q4VC31 SLC25A36P1-201ENST00000590111 465 ntBASIC4.26□□□□□ -1.73
CCDC58Q4VC31 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC58Q4VC31 AC005520.3-201ENST00000602874 370 ntBASIC4.26□□□□□ -1.73
CCDC58Q4VC31 AL589674.2-201ENST00000604304 337 ntBASIC4.26□□□□□ -1.73
CCDC58Q4VC31 AC010424.2-201ENST00000607594 443 ntBASIC4.26□□□□□ -1.73
CCDC58Q4VC31 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC58Q4VC31 AC136428.4-201ENST00000634254 1155 ntBASIC4.26□□□□□ -1.73
CCDC58Q4VC31 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC58Q4VC31 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CCDC58Q4VC31 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC58Q4VC31 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC58Q4VC31 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC58Q4VC31 AL133412.1-201ENST00000380194 2992 ntBASIC4.26□□□□□ -1.73
CCDC58Q4VC31 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
CCDC58Q4VC31 PNPT1P2-201ENST00000456768 2050 ntBASIC4.25□□□□□ -1.73
CCDC58Q4VC31 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC58Q4VC31 SNORD74.4-201ENST00000364129 80 ntBASIC4.25□□□□□ -1.73
CCDC58Q4VC31 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC58Q4VC31 RNU6-1279P-201ENST00000383917 103 ntBASIC4.25□□□□□ -1.73
CCDC58Q4VC31 RN7SKP126-201ENST00000411143 300 ntBASIC4.25□□□□□ -1.73
CCDC58Q4VC31 AL450992.3-201ENST00000413192 568 ntBASIC4.25□□□□□ -1.73
CCDC58Q4VC31 AC011753.3-201ENST00000443436 406 ntBASIC4.25□□□□□ -1.73
CCDC58Q4VC31 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC58Q4VC31 RPS26P28-201ENST00000470806 348 ntBASIC4.25□□□□□ -1.73
CCDC58Q4VC31 AC105918.1-201ENST00000474399 838 ntBASIC4.25□□□□□ -1.73
CCDC58Q4VC31 RN7SL41P-201ENST00000476144 297 ntBASIC4.25□□□□□ -1.73
CCDC58Q4VC31 RN7SL222P-201ENST00000476452 299 ntBASIC4.25□□□□□ -1.73
CCDC58Q4VC31 AC108022.1-201ENST00000493466 478 ntBASIC4.25□□□□□ -1.73
CCDC58Q4VC31 AC146944.2-203ENST00000502493 354 ntBASIC4.25□□□□□ -1.73
CCDC58Q4VC31 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC58Q4VC31 AC139495.1-202ENST00000513164 354 ntBASIC4.25□□□□□ -1.73
CCDC58Q4VC31 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC58Q4VC31 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC58Q4VC31 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC58Q4VC31 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC58Q4VC31 AL121834.1-201ENST00000572284 509 ntBASIC4.25□□□□□ -1.73
CCDC58Q4VC31 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms