Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
USF2Q15853 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
USF2Q15853 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
USF2Q15853 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.09□□□□□ -1.76
USF2Q15853 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.09□□□□□ -1.76
USF2Q15853 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.09□□□□□ -1.76
USF2Q15853 AC023421.1-201ENST00000590535 1785 ntBASIC4.09□□□□□ -1.76
USF2Q15853 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
USF2Q15853 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
USF2Q15853 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
USF2Q15853 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.08□□□□□ -1.76
USF2Q15853 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.08□□□□□ -1.76
USF2Q15853 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
USF2Q15853 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
USF2Q15853 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
USF2Q15853 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
USF2Q15853 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
USF2Q15853 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
USF2Q15853 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.08□□□□□ -1.76
USF2Q15853 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
USF2Q15853 MIR448-201ENST00000362131 111 ntBASIC4.08□□□□□ -1.76
USF2Q15853 RNA5SP319-201ENST00000362768 119 ntBASIC4.08□□□□□ -1.76
USF2Q15853 RNA5SP234-201ENST00000363916 119 ntBASIC4.08□□□□□ -1.76
USF2Q15853 MIR320B1-201ENST00000390209 79 ntBASIC4.08□□□□□ -1.76
USF2Q15853 HSPA8P15-201ENST00000401676 786 ntBASIC4.08□□□□□ -1.76
USF2Q15853 OR4K12P-201ENST00000406538 961 ntBASIC4.08□□□□□ -1.76
USF2Q15853 RNA5SP178-201ENST00000410380 128 ntBASIC4.08□□□□□ -1.76
USF2Q15853 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.08□□□□□ -1.76
USF2Q15853 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.08□□□□□ -1.76
USF2Q15853 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.08□□□□□ -1.76
USF2Q15853 TRGV6-201ENST00000417928 299 ntBASIC4.08□□□□□ -1.76
USF2Q15853 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.08□□□□□ -1.76
USF2Q15853 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.08□□□□□ -1.76
USF2Q15853 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.08□□□□□ -1.76
USF2Q15853 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.08□□□□□ -1.76
USF2Q15853 MTCYBP29-201ENST00000436327 1006 ntBASIC4.08□□□□□ -1.76
USF2Q15853 AL390119.1-201ENST00000440329 312 ntBASIC4.08□□□□□ -1.76
USF2Q15853 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.08□□□□□ -1.76
USF2Q15853 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
USF2Q15853 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.08□□□□□ -1.76
USF2Q15853 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.08□□□□□ -1.76
USF2Q15853 AC104634.1-201ENST00000452720 462 ntBASIC4.08□□□□□ -1.76
USF2Q15853 SETP20-201ENST00000457046 852 ntBASIC4.08□□□□□ -1.76
USF2Q15853 AC079168.1-201ENST00000458741 345 ntBASIC4.08□□□□□ -1.76
USF2Q15853 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.08□□□□□ -1.76
USF2Q15853 AC074087.1-201ENST00000512059 724 ntBASIC4.08□□□□□ -1.76
USF2Q15853 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
USF2Q15853 MTATP6P1-201ENST00000514057 681 ntBASIC4.08□□□□□ -1.76
USF2Q15853 MYL12AP1-201ENST00000518490 515 ntBASIC4.08□□□□□ -1.76
USF2Q15853 OR5AZ1P-201ENST00000527448 943 ntBASIC4.08□□□□□ -1.76
USF2Q15853 YWHABP2-201ENST00000540201 713 ntBASIC4.08□□□□□ -1.76
USF2Q15853 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.08□□□□□ -1.76
USF2Q15853 AC015720.2-201ENST00000567709 334 ntBASIC4.08□□□□□ -1.76
USF2Q15853 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.08□□□□□ -1.76
USF2Q15853 RBM22P1-201ENST00000578589 1214 ntBASIC4.08□□□□□ -1.76
USF2Q15853 AC011840.5-201ENST00000582125 771 ntBASIC4.08□□□□□ -1.76
USF2Q15853 AC011477.5-201ENST00000586571 259 ntBASIC4.08□□□□□ -1.76
USF2Q15853 AC005252.1-201ENST00000604518 1063 ntBASIC4.08□□□□□ -1.76
USF2Q15853 AC011626.1-201ENST00000604710 562 ntBASIC4.08□□□□□ -1.76
USF2Q15853 AC127024.6-201ENST00000621598 424 ntBASIC4.08□□□□□ -1.76
USF2Q15853 AP000843.1-201ENST00000624880 701 ntBASIC4.08□□□□□ -1.76
USF2Q15853 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.08□□□□□ -1.76
USF2Q15853 MFSD8-220ENST00000641243 1422 ntBASIC4.08□□□□□ -1.76
USF2Q15853 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
USF2Q15853 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
USF2Q15853 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.08□□□□□ -1.76
USF2Q15853 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
USF2Q15853 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
USF2Q15853 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
USF2Q15853 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
USF2Q15853 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
USF2Q15853 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.07□□□□□ -1.76
USF2Q15853 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
USF2Q15853 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.07□□□□□ -1.76
USF2Q15853 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
USF2Q15853 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
USF2Q15853 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
USF2Q15853 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
USF2Q15853 AL133268.1-201ENST00000405676 1401 ntBASIC4.07□□□□□ -1.76
USF2Q15853 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
USF2Q15853 MIR323A-201ENST00000362199 86 ntBASIC4.07□□□□□ -1.76
USF2Q15853 SNORA62.2-201ENST00000364672 152 ntBASIC4.07□□□□□ -1.76
USF2Q15853 RNA5SP132-201ENST00000364725 118 ntBASIC4.07□□□□□ -1.76
USF2Q15853 U3.15-201ENST00000365398 212 ntBASIC4.07□□□□□ -1.76
USF2Q15853 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
USF2Q15853 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
USF2Q15853 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.07□□□□□ -1.76
USF2Q15853 RNU6-532P-201ENST00000384318 107 ntBASIC4.07□□□□□ -1.76
USF2Q15853 MIR3074-201ENST00000384885 81 ntBASIC4.07□□□□□ -1.76
USF2Q15853 SNORD65-201ENST00000391079 73 ntBASIC4.07□□□□□ -1.76
USF2Q15853 SNORA17A-201ENST00000391185 133 ntBASIC4.07□□□□□ -1.76
USF2Q15853 AL031985.1-201ENST00000392713 418 ntBASIC4.07□□□□□ -1.76
USF2Q15853 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC4.07□□□□□ -1.76
USF2Q15853 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.07□□□□□ -1.76
USF2Q15853 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.07□□□□□ -1.76
USF2Q15853 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.07□□□□□ -1.76
USF2Q15853 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.07□□□□□ -1.76
USF2Q15853 RPS26P4-201ENST00000431743 355 ntBASIC4.07□□□□□ -1.76
USF2Q15853 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.07□□□□□ -1.76
USF2Q15853 HMGN1P36-201ENST00000446623 298 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms