Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.38□□□□□ -1.71
CX3CL1P78423 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.38□□□□□ -1.71
CX3CL1P78423 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.38□□□□□ -1.71
CX3CL1P78423 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.38□□□□□ -1.71
CX3CL1P78423 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.38□□□□□ -1.71
CX3CL1P78423 AC068714.1-201ENST00000559623 800 ntBASIC4.38□□□□□ -1.71
CX3CL1P78423 AL049838.1-201ENST00000563647 981 ntBASIC4.38□□□□□ -1.71
CX3CL1P78423 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.38□□□□□ -1.71
CX3CL1P78423 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.38□□□□□ -1.71
CX3CL1P78423 MIR3614-201ENST00000581261 86 ntBASIC4.38□□□□□ -1.71
CX3CL1P78423 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.38□□□□□ -1.71
CX3CL1P78423 FO393422.1-201ENST00000603908 708 ntBASIC4.38□□□□□ -1.71
CX3CL1P78423 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.38□□□□□ -1.71
CX3CL1P78423 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.38□□□□□ -1.71
CX3CL1P78423 AC103703.1-201ENST00000634783 663 ntBASIC4.38□□□□□ -1.71
CX3CL1P78423 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.38□□□□□ -1.71
CX3CL1P78423 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.38□□□□□ -1.71
CX3CL1P78423 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
CX3CL1P78423 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CX3CL1P78423 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CX3CL1P78423 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CX3CL1P78423 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CX3CL1P78423 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CX3CL1P78423 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CX3CL1P78423 AC079097.1-201ENST00000512187 1399 ntBASIC4.38□□□□□ -1.71
CX3CL1P78423 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CX3CL1P78423 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CX3CL1P78423 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CX3CL1P78423 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CX3CL1P78423 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
CX3CL1P78423 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CX3CL1P78423 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CX3CL1P78423 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.37□□□□□ -1.71
CX3CL1P78423 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.37□□□□□ -1.71
CX3CL1P78423 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CX3CL1P78423 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
CX3CL1P78423 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
CX3CL1P78423 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CX3CL1P78423 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.37□□□□□ -1.71
CX3CL1P78423 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.37□□□□□ -1.71
CX3CL1P78423 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CX3CL1P78423 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CX3CL1P78423 OR9K1P-201ENST00000326513 941 ntBASIC4.37□□□□□ -1.71
CX3CL1P78423 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.37□□□□□ -1.71
CX3CL1P78423 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CX3CL1P78423 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.37□□□□□ -1.71
CX3CL1P78423 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CX3CL1P78423 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CX3CL1P78423 RNA5SP178-201ENST00000410380 128 ntBASIC4.37□□□□□ -1.71
CX3CL1P78423 MTCO2P8-201ENST00000412213 658 ntBASIC4.37□□□□□ -1.71
CX3CL1P78423 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.37□□□□□ -1.71
CX3CL1P78423 AC246680.2-201ENST00000422106 389 ntBASIC4.37□□□□□ -1.71
CX3CL1P78423 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CX3CL1P78423 AC104843.2-201ENST00000427666 297 ntBASIC4.37□□□□□ -1.71
CX3CL1P78423 AC114973.1-201ENST00000429057 632 ntBASIC4.37□□□□□ -1.71
CX3CL1P78423 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.37□□□□□ -1.71
CX3CL1P78423 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.37□□□□□ -1.71
CX3CL1P78423 AC092170.1-201ENST00000440211 356 ntBASIC4.37□□□□□ -1.71
CX3CL1P78423 AC073465.2-201ENST00000440938 498 ntBASIC4.37□□□□□ -1.71
CX3CL1P78423 RRM2P4-201ENST00000441721 562 ntBASIC4.37□□□□□ -1.71
CX3CL1P78423 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.37□□□□□ -1.71
CX3CL1P78423 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.37□□□□□ -1.71
CX3CL1P78423 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CX3CL1P78423 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.37□□□□□ -1.71
CX3CL1P78423 AC243772.1-201ENST00000451620 410 ntBASIC4.37□□□□□ -1.71
CX3CL1P78423 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.37□□□□□ -1.71
CX3CL1P78423 RPS27AP2-201ENST00000457576 465 ntBASIC4.37□□□□□ -1.71
CX3CL1P78423 AC005912.1-201ENST00000495392 255 ntBASIC4.37□□□□□ -1.71
CX3CL1P78423 AC010627.1-201ENST00000503819 1294 ntBASIC4.37□□□□□ -1.71
CX3CL1P78423 AC096571.1-202ENST00000506634 735 ntBASIC4.37□□□□□ -1.71
CX3CL1P78423 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.37□□□□□ -1.71
CX3CL1P78423 AC008565.1-201ENST00000509046 885 ntBASIC4.37□□□□□ -1.71
CX3CL1P78423 AC098976.1-201ENST00000513014 541 ntBASIC4.37□□□□□ -1.71
CX3CL1P78423 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.37□□□□□ -1.71
CX3CL1P78423 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.37□□□□□ -1.71
CX3CL1P78423 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.37□□□□□ -1.71
CX3CL1P78423 AP001372.4-201ENST00000524889 472 ntBASIC4.37□□□□□ -1.71
CX3CL1P78423 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.37□□□□□ -1.71
CX3CL1P78423 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CX3CL1P78423 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.37□□□□□ -1.71
CX3CL1P78423 AC022404.1-201ENST00000555320 273 ntBASIC4.37□□□□□ -1.71
CX3CL1P78423 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.37□□□□□ -1.71
CX3CL1P78423 ZNF971P-201ENST00000562068 1249 ntBASIC4.37□□□□□ -1.71
CX3CL1P78423 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.37□□□□□ -1.71
CX3CL1P78423 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.37□□□□□ -1.71
CX3CL1P78423 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.37□□□□□ -1.71
CX3CL1P78423 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.37□□□□□ -1.71
CX3CL1P78423 AC012616.1-201ENST00000600294 197 ntBASIC4.37□□□□□ -1.71
CX3CL1P78423 AC126175.1-201ENST00000617041 758 ntBASIC4.37□□□□□ -1.71
CX3CL1P78423 U6.48-201ENST00000618523 106 ntBASIC4.37□□□□□ -1.71
CX3CL1P78423 AC026124.2-201ENST00000621847 656 ntBASIC4.37□□□□□ -1.71
CX3CL1P78423 AC132068.1-201ENST00000623805 459 ntBASIC4.37□□□□□ -1.71
CX3CL1P78423 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.37□□□□□ -1.71
CX3CL1P78423 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.37□□□□□ -1.71
CX3CL1P78423 AL590396.4-201ENST00000636779 956 ntBASIC4.37□□□□□ -1.71
CX3CL1P78423 AC139713.2-210ENST00000641741 992 ntBASIC4.37□□□□□ -1.71
CX3CL1P78423 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.37□□□□□ -1.71
CX3CL1P78423 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CX3CL1P78423 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.37□□□□□ -1.71
CX3CL1P78423 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms