Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 RN7SKP147-201ENST00000517154 244 ntBASIC3.15□□□□□ -1.91
RPL39P62891 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC3.15□□□□□ -1.91
RPL39P62891 AC125612.1-201ENST00000547580 377 ntBASIC3.15□□□□□ -1.91
RPL39P62891 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC3.15□□□□□ -1.91
RPL39P62891 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC3.15□□□□□ -1.91
RPL39P62891 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC3.15□□□□□ -1.91
RPL39P62891 NDUFA5P11-201ENST00000567995 343 ntBASIC3.15□□□□□ -1.91
RPL39P62891 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.15□□□□□ -1.91
RPL39P62891 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.15□□□□□ -1.91
RPL39P62891 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
RPL39P62891 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC3.15□□□□□ -1.91
RPL39P62891 AL139395.1-201ENST00000603662 160 ntBASIC3.15□□□□□ -1.91
RPL39P62891 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC3.15□□□□□ -1.91
RPL39P62891 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC3.15□□□□□ -1.91
RPL39P62891 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RPL39P62891 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RPL39P62891 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RPL39P62891 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RPL39P62891 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC3.15□□□□□ -1.91
RPL39P62891 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC3.15□□□□□ -1.91
RPL39P62891 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC3.15□□□□□ -1.91
RPL39P62891 AC139426.3-201ENST00000605648 2059 ntBASIC3.15□□□□□ -1.91
RPL39P62891 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RPL39P62891 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
RPL39P62891 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RPL39P62891 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
RPL39P62891 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RPL39P62891 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC3.14□□□□□ -1.91
RPL39P62891 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RPL39P62891 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RPL39P62891 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
RPL39P62891 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
RPL39P62891 AC108467.2-201ENST00000617640 1597 ntBASIC3.14□□□□□ -1.91
RPL39P62891 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC3.14□□□□□ -1.91
RPL39P62891 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RPL39P62891 MIR323A-201ENST00000362199 86 ntBASIC3.14□□□□□ -1.91
RPL39P62891 RN7SKP95-201ENST00000362860 303 ntBASIC3.14□□□□□ -1.91
RPL39P62891 RNA5SP307-201ENST00000362863 116 ntBASIC3.14□□□□□ -1.91
RPL39P62891 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RPL39P62891 AL645733.1-201ENST00000402250 217 ntBASIC3.14□□□□□ -1.91
RPL39P62891 MIR1286-201ENST00000408112 78 ntBASIC3.14□□□□□ -1.91
RPL39P62891 RN7SKP267-201ENST00000410381 285 ntBASIC3.14□□□□□ -1.91
RPL39P62891 CHEK2P3-201ENST00000416118 248 ntBASIC3.14□□□□□ -1.91
RPL39P62891 NANOGP6-201ENST00000429190 847 ntBASIC3.14□□□□□ -1.91
RPL39P62891 AL121776.1-201ENST00000429337 372 ntBASIC3.14□□□□□ -1.91
RPL39P62891 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC3.14□□□□□ -1.91
RPL39P62891 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC3.14□□□□□ -1.91
RPL39P62891 AC079841.1-201ENST00000481228 950 ntBASIC3.14□□□□□ -1.91
RPL39P62891 AC025445.1-201ENST00000502728 300 ntBASIC3.14□□□□□ -1.91
RPL39P62891 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC3.14□□□□□ -1.91
RPL39P62891 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC3.14□□□□□ -1.91
RPL39P62891 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RPL39P62891 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC3.14□□□□□ -1.91
RPL39P62891 IGKV2-18-201ENST00000522607 343 ntBASIC3.14□□□□□ -1.91
RPL39P62891 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RPL39P62891 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC3.14□□□□□ -1.91
RPL39P62891 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.14□□□□□ -1.91
RPL39P62891 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.14□□□□□ -1.91
RPL39P62891 AC105129.1-201ENST00000560250 297 ntBASIC3.14□□□□□ -1.91
RPL39P62891 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
RPL39P62891 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC3.14□□□□□ -1.91
RPL39P62891 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.14□□□□□ -1.91
RPL39P62891 AL049767.1-202ENST00000637826 242 ntBASIC3.14□□□□□ -1.91
RPL39P62891 LINC01739-205ENST00000641890 573 ntBASIC3.14□□□□□ -1.91
RPL39P62891 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.14□□□□□ -1.91
RPL39P62891 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RPL39P62891 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
RPL39P62891 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
RPL39P62891 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
RPL39P62891 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
RPL39P62891 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
RPL39P62891 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RPL39P62891 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.14□□□□□ -1.91
RPL39P62891 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RPL39P62891 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RPL39P62891 MGP-201ENST00000228938 694 ntTSL 3 BASIC3.13□□□□□ -1.91
RPL39P62891 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.13□□□□□ -1.91
RPL39P62891 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
RPL39P62891 MIR223-201ENST00000385204 110 ntBASIC3.13□□□□□ -1.91
RPL39P62891 RNU6ATAC7P-201ENST00000408111 127 ntBASIC3.13□□□□□ -1.91
RPL39P62891 AC099535.1-201ENST00000408928 371 ntBASIC3.13□□□□□ -1.91
RPL39P62891 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC3.13□□□□□ -1.91
RPL39P62891 AC140479.3-201ENST00000418944 1126 ntBASIC3.13□□□□□ -1.91
RPL39P62891 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.13□□□□□ -1.91
RPL39P62891 RPL24P2-201ENST00000421023 475 ntBASIC3.13□□□□□ -1.91
RPL39P62891 RAD23BP1-201ENST00000421404 1227 ntBASIC3.13□□□□□ -1.91
RPL39P62891 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.13□□□□□ -1.91
RPL39P62891 RPEP2-201ENST00000432149 701 ntBASIC3.13□□□□□ -1.91
RPL39P62891 ELOCP18-201ENST00000434209 337 ntBASIC3.13□□□□□ -1.91
RPL39P62891 AC092647.3-201ENST00000443044 633 ntBASIC3.13□□□□□ -1.91
RPL39P62891 VN1R32P-201ENST00000452234 905 ntBASIC3.13□□□□□ -1.91
RPL39P62891 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC3.13□□□□□ -1.91
RPL39P62891 snoU13.20-201ENST00000459180 104 ntBASIC3.13□□□□□ -1.91
RPL39P62891 SCARNA10-201ENST00000459255 330 ntBASIC3.13□□□□□ -1.91
RPL39P62891 SCARNA22-201ENST00000503991 125 ntBASIC3.13□□□□□ -1.91
RPL39P62891 GAPDHP56-201ENST00000506031 988 ntBASIC3.13□□□□□ -1.91
RPL39P62891 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC3.13□□□□□ -1.91
RPL39P62891 HIGD1AP14-201ENST00000507617 282 ntBASIC3.13□□□□□ -1.91
RPL39P62891 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC3.13□□□□□ -1.91
RPL39P62891 PARP4P3-201ENST00000510265 317 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms