Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 MIR92B-201ENST00000607575 96 ntBASIC5.37□□□□□ -1.55
VCPP55072 BNIP3P41-202ENST00000616656 861 ntBASIC5.37□□□□□ -1.55
VCPP55072 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.37□□□□□ -1.55
VCPP55072 AP001005.3-201ENST00000622049 129 ntBASIC5.37□□□□□ -1.55
VCPP55072 AP000648.2-201ENST00000624182 404 ntBASIC5.37□□□□□ -1.55
VCPP55072 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.37□□□□□ -1.55
VCPP55072 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.37□□□□□ -1.55
VCPP55072 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
VCPP55072 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
VCPP55072 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.37□□□□□ -1.55
VCPP55072 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
VCPP55072 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VCPP55072 AC025574.1-201ENST00000554784 1653 ntBASIC5.37□□□□□ -1.55
VCPP55072 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VCPP55072 AC100778.3-201ENST00000580060 1750 ntBASIC5.37□□□□□ -1.55
VCPP55072 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VCPP55072 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.36□□□□□ -1.55
VCPP55072 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
VCPP55072 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VCPP55072 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VCPP55072 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
VCPP55072 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.36□□□□□ -1.55
VCPP55072 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
VCPP55072 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
VCPP55072 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
VCPP55072 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VCPP55072 RN7SKP74-201ENST00000362849 309 ntBASIC5.36□□□□□ -1.55
VCPP55072 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
VCPP55072 OR8V1P-201ENST00000395193 873 ntBASIC5.36□□□□□ -1.55
VCPP55072 U3.32-201ENST00000408116 212 ntBASIC5.36□□□□□ -1.55
VCPP55072 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.36□□□□□ -1.55
VCPP55072 AC007738.1-201ENST00000413892 348 ntBASIC5.36□□□□□ -1.55
VCPP55072 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.36□□□□□ -1.55
VCPP55072 OR6C64P-201ENST00000419708 825 ntBASIC5.36□□□□□ -1.55
VCPP55072 DDX39BP1-205ENST00000422507 192 ntBASIC5.36□□□□□ -1.55
VCPP55072 AC104333.2-201ENST00000422630 192 ntBASIC5.36□□□□□ -1.55
VCPP55072 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.36□□□□□ -1.55
VCPP55072 TDGF1P1-201ENST00000445734 527 ntBASIC5.36□□□□□ -1.55
VCPP55072 AL589765.3-201ENST00000446084 462 ntBASIC5.36□□□□□ -1.55
VCPP55072 MTND4LP12-201ENST00000448237 295 ntBASIC5.36□□□□□ -1.55
VCPP55072 MTND6P32-201ENST00000457611 483 ntBASIC5.36□□□□□ -1.55
VCPP55072 AC006967.1-201ENST00000467608 589 ntBASIC5.36□□□□□ -1.55
VCPP55072 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.36□□□□□ -1.55
VCPP55072 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VCPP55072 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC5.36□□□□□ -1.55
VCPP55072 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.36□□□□□ -1.55
VCPP55072 OR8A2P-201ENST00000528631 952 ntBASIC5.36□□□□□ -1.55
VCPP55072 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.36□□□□□ -1.55
VCPP55072 MIR4675-201ENST00000577898 77 ntBASIC5.36□□□□□ -1.55
VCPP55072 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.36□□□□□ -1.55
VCPP55072 MIR3667-201ENST00000581025 74 ntBASIC5.36□□□□□ -1.55
VCPP55072 AC124856.1-201ENST00000600819 896 ntBASIC5.36□□□□□ -1.55
VCPP55072 AC068790.7-201ENST00000602347 528 ntBASIC5.36□□□□□ -1.55
VCPP55072 BX005214.3-202ENST00000619809 325 ntBASIC5.36□□□□□ -1.55
VCPP55072 AP003400.2-201ENST00000624036 666 ntBASIC5.36□□□□□ -1.55
VCPP55072 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.36□□□□□ -1.55
VCPP55072 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VCPP55072 BTBD10P1-201ENST00000549824 1352 ntBASIC5.36□□□□□ -1.55
VCPP55072 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VCPP55072 NXF4-202ENST00000416098 1465 ntBASIC5.36□□□□□ -1.55
VCPP55072 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VCPP55072 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.36□□□□□ -1.55
VCPP55072 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VCPP55072 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.36□□□□□ -1.55
VCPP55072 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.36□□□□□ -1.55
VCPP55072 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VCPP55072 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VCPP55072 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VCPP55072 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
VCPP55072 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.36□□□□□ -1.55
VCPP55072 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VCPP55072 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
VCPP55072 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
VCPP55072 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.35□□□□□ -1.55
VCPP55072 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.35□□□□□ -1.55
VCPP55072 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.35□□□□□ -1.55
VCPP55072 AC017079.1-201ENST00000333650 415 ntBASIC5.35□□□□□ -1.55
VCPP55072 RNA5SP515-201ENST00000364570 118 ntBASIC5.35□□□□□ -1.55
VCPP55072 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
VCPP55072 RPL10P10-201ENST00000403509 664 ntBASIC5.35□□□□□ -1.55
VCPP55072 MIR1182-201ENST00000408363 97 ntBASIC5.35□□□□□ -1.55
VCPP55072 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.35□□□□□ -1.55
VCPP55072 AC073143.1-201ENST00000436316 395 ntBASIC5.35□□□□□ -1.55
VCPP55072 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.35□□□□□ -1.55
VCPP55072 RPL34P20-201ENST00000442771 351 ntBASIC5.35□□□□□ -1.55
VCPP55072 RPL7AP61-201ENST00000443410 636 ntBASIC5.35□□□□□ -1.55
VCPP55072 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.35□□□□□ -1.55
VCPP55072 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC5.35□□□□□ -1.55
VCPP55072 OR52J1P-201ENST00000450596 932 ntBASIC5.35□□□□□ -1.55
VCPP55072 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.35□□□□□ -1.55
VCPP55072 AC097173.1-201ENST00000505862 819 ntBASIC5.35□□□□□ -1.55
VCPP55072 GCSHP4-201ENST00000538792 439 ntBASIC5.35□□□□□ -1.55
VCPP55072 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.35□□□□□ -1.55
VCPP55072 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.35□□□□□ -1.55
VCPP55072 MIR4277-201ENST00000578298 84 ntBASIC5.35□□□□□ -1.55
VCPP55072 MIR3936-201ENST00000584304 110 ntBASIC5.35□□□□□ -1.55
VCPP55072 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.35□□□□□ -1.55
VCPP55072 MEMO1P5-201ENST00000604810 406 ntBASIC5.35□□□□□ -1.55
VCPP55072 AP005131.7-201ENST00000610087 611 ntBASIC5.35□□□□□ -1.55
VCPP55072 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms