Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 RPL6P29-201ENST00000414863 865 ntBASIC4.87□□□□□ -1.63
HTTP42858 TMX2P1-201ENST00000436507 708 ntBASIC4.87□□□□□ -1.63
HTTP42858 AC114495.1-201ENST00000441274 436 ntBASIC4.87□□□□□ -1.63
HTTP42858 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.87□□□□□ -1.63
HTTP42858 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.87□□□□□ -1.63
HTTP42858 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.87□□□□□ -1.63
HTTP42858 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HTTP42858 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HTTP42858 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HTTP42858 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
HTTP42858 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.86□□□□□ -1.63
HTTP42858 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.86□□□□□ -1.63
HTTP42858 CAB39P1-201ENST00000502277 460 ntBASIC4.86□□□□□ -1.63
HTTP42858 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.86□□□□□ -1.63
HTTP42858 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.86□□□□□ -1.63
HTTP42858 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.86□□□□□ -1.63
HTTP42858 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC4.86□□□□□ -1.63
HTTP42858 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
HTTP42858 MIR7975-201ENST00000619350 68 ntBASIC4.86□□□□□ -1.63
HTTP42858 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HTTP42858 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
HTTP42858 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HTTP42858 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HTTP42858 ZNF566-204ENST00000434377 5197 ntAPPRIS P3 TSL 2 BASIC4.86□□□□□ -1.63
HTTP42858 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
HTTP42858 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HTTP42858 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HTTP42858 ATP5G1P3-201ENST00000463301 410 ntBASIC4.86□□□□□ -1.63
HTTP42858 RNA5SP73-201ENST00000516744 108 ntBASIC4.86□□□□□ -1.63
HTTP42858 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.86□□□□□ -1.63
HTTP42858 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC4.86□□□□□ -1.63
HTTP42858 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
HTTP42858 LINC02035-201ENST00000610128 5476 ntBASIC4.86□□□□□ -1.63
HTTP42858 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.86□□□□□ -1.63
HTTP42858 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.86□□□□□ -1.63
HTTP42858 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.86□□□□□ -1.63
HTTP42858 SNORA70.24-201ENST00000517233 118 ntBASIC4.86□□□□□ -1.63
HTTP42858 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.86□□□□□ -1.63
HTTP42858 AL137843.1-201ENST00000605078 385 ntBASIC4.86□□□□□ -1.63
HTTP42858 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
HTTP42858 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HTTP42858 TRIM51GP-201ENST00000534741 1350 ntBASIC4.85□□□□□ -1.63
HTTP42858 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
HTTP42858 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HTTP42858 TET1P1-201ENST00000426627 2301 ntBASIC4.85□□□□□ -1.63
HTTP42858 AC024560.2-201ENST00000507981 1497 ntBASIC4.85□□□□□ -1.63
HTTP42858 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.85□□□□□ -1.63
HTTP42858 AC006058.1-201ENST00000568686 5067 ntBASIC4.85□□□□□ -1.63
HTTP42858 AC125257.1-201ENST00000560400 2930 ntBASIC4.85□□□□□ -1.63
HTTP42858 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
HTTP42858 AC016588.2-201ENST00000632484 3021 ntBASIC4.85□□□□□ -1.63
HTTP42858 RNA5SP72-201ENST00000364442 117 ntBASIC4.85□□□□□ -1.63
HTTP42858 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
HTTP42858 SNORA70.6-201ENST00000383934 134 ntBASIC4.85□□□□□ -1.63
HTTP42858 RNU11-4P-201ENST00000391149 133 ntBASIC4.85□□□□□ -1.63
HTTP42858 RAB9AP3-201ENST00000412737 573 ntBASIC4.85□□□□□ -1.63
HTTP42858 AC092162.1-201ENST00000432828 434 ntBASIC4.85□□□□□ -1.63
HTTP42858 BX679664.2-201ENST00000439282 283 ntBASIC4.85□□□□□ -1.63
HTTP42858 UBE2V1P3-201ENST00000439651 417 ntBASIC4.85□□□□□ -1.63
HTTP42858 AC023271.1-201ENST00000445936 1090 ntBASIC4.85□□□□□ -1.63
HTTP42858 RAB9AP1-201ENST00000449393 573 ntBASIC4.85□□□□□ -1.63
HTTP42858 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.85□□□□□ -1.63
HTTP42858 PARP4P3-201ENST00000510265 317 ntBASIC4.85□□□□□ -1.63
HTTP42858 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.85□□□□□ -1.63
HTTP42858 AC068993.1-201ENST00000546724 589 ntBASIC4.85□□□□□ -1.63
HTTP42858 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.85□□□□□ -1.63
HTTP42858 AC010608.2-201ENST00000624830 470 ntBASIC4.85□□□□□ -1.63
HTTP42858 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
HTTP42858 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
HTTP42858 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
HTTP42858 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
HTTP42858 AL691449.1-201ENST00000426570 421 ntBASIC4.85□□□□□ -1.63
HTTP42858 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.85□□□□□ -1.63
HTTP42858 DUXAP2-201ENST00000519198 589 ntBASIC4.85□□□□□ -1.63
HTTP42858 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC4.85□□□□□ -1.63
HTTP42858 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HTTP42858 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC4.84□□□□□ -1.63
HTTP42858 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HTTP42858 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
HTTP42858 OR4A15-201ENST00000314706 1035 ntBASIC4.84□□□□□ -1.63
HTTP42858 AP000357.1-201ENST00000409926 1165 ntBASIC4.84□□□□□ -1.63
HTTP42858 MRPL48P1-201ENST00000445390 636 ntBASIC4.84□□□□□ -1.63
HTTP42858 NPM1P21-201ENST00000513394 762 ntBASIC4.84□□□□□ -1.63
HTTP42858 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.84□□□□□ -1.63
HTTP42858 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.84□□□□□ -1.63
HTTP42858 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.84□□□□□ -1.63
HTTP42858 LINC01808-202ENST00000641680 1116 ntBASIC4.84□□□□□ -1.63
HTTP42858 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
HTTP42858 PLEKHG4B-201ENST00000283426 11515 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
HTTP42858 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HTTP42858 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.84□□□□□ -1.63
HTTP42858 AL158827.1-201ENST00000416300 391 ntBASIC4.84□□□□□ -1.63
HTTP42858 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.84□□□□□ -1.63
HTTP42858 AC115285.1-201ENST00000424879 736 ntBASIC4.84□□□□□ -1.63
HTTP42858 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.84□□□□□ -1.63
HTTP42858 AL159987.2-201ENST00000432754 307 ntBASIC4.84□□□□□ -1.63
HTTP42858 RN7SKP67-201ENST00000515905 235 ntBASIC4.84□□□□□ -1.63
HTTP42858 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.84□□□□□ -1.63
HTTP42858 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.84□□□□□ -1.63
HTTP42858 RPL21P12-201ENST00000559810 515 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms