Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.11□□□□□ -1.43
SMARCA1P28370 AC099063.2-201ENST00000446360 662 ntBASIC6.11□□□□□ -1.43
SMARCA1P28370 HMGB1P5-202ENST00000451497 985 ntBASIC6.11□□□□□ -1.43
SMARCA1P28370 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC6.11□□□□□ -1.43
SMARCA1P28370 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC6.11□□□□□ -1.43
SMARCA1P28370 MGST2-204ENST00000506797 634 ntTSL 2 BASIC6.11□□□□□ -1.43
SMARCA1P28370 PRELID3BP5-201ENST00000508612 460 ntBASIC6.11□□□□□ -1.43
SMARCA1P28370 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC6.11□□□□□ -1.43
SMARCA1P28370 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.11□□□□□ -1.43
SMARCA1P28370 MORF4L1P3-201ENST00000525966 950 ntBASIC6.11□□□□□ -1.43
SMARCA1P28370 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.11□□□□□ -1.43
SMARCA1P28370 OR8K4P-201ENST00000534608 872 ntBASIC6.11□□□□□ -1.43
SMARCA1P28370 AC024940.3-201ENST00000538551 316 ntBASIC6.11□□□□□ -1.43
SMARCA1P28370 ASB8-215ENST00000540782 659 ntTSL 3 BASIC6.11□□□□□ -1.43
SMARCA1P28370 AC125612.1-201ENST00000547580 377 ntBASIC6.11□□□□□ -1.43
SMARCA1P28370 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.11□□□□□ -1.43
SMARCA1P28370 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC6.11□□□□□ -1.43
SMARCA1P28370 AC008814.1-201ENST00000603797 406 ntBASIC6.11□□□□□ -1.43
SMARCA1P28370 RNU4-5P-201ENST00000607255 135 ntBASIC6.11□□□□□ -1.43
SMARCA1P28370 AC126915.2-201ENST00000610957 190 ntBASIC6.11□□□□□ -1.43
SMARCA1P28370 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.11□□□□□ -1.43
SMARCA1P28370 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.11□□□□□ -1.43
SMARCA1P28370 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.11□□□□□ -1.43
SMARCA1P28370 AC009464.1-201ENST00000615731 469 ntBASIC6.11□□□□□ -1.43
SMARCA1P28370 AL122125.1-201ENST00000616999 600 ntBASIC6.11□□□□□ -1.43
SMARCA1P28370 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.11□□□□□ -1.43
SMARCA1P28370 AC083865.1-201ENST00000636634 831 ntBASIC6.11□□□□□ -1.43
SMARCA1P28370 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
SMARCA1P28370 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.11□□□□□ -1.43
SMARCA1P28370 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
SMARCA1P28370 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SMARCA1P28370 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.11□□□□□ -1.43
SMARCA1P28370 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
SMARCA1P28370 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SMARCA1P28370 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SMARCA1P28370 AC011493.1-201ENST00000596753 1632 ntBASIC6.1□□□□□ -1.43
SMARCA1P28370 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
SMARCA1P28370 AC006210.2-201ENST00000367074 1545 ntBASIC6.1□□□□□ -1.43
SMARCA1P28370 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
SMARCA1P28370 PANDAR-201ENST00000629595 1506 ntBASIC6.1□□□□□ -1.43
SMARCA1P28370 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
SMARCA1P28370 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SMARCA1P28370 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
SMARCA1P28370 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.1□□□□□ -1.43
SMARCA1P28370 AC004656.1-201ENST00000568479 4951 ntBASIC6.1□□□□□ -1.43
SMARCA1P28370 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6.1□□□□□ -1.43
SMARCA1P28370 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SMARCA1P28370 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
SMARCA1P28370 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SMARCA1P28370 OR9G4-201ENST00000302957 984 ntBASIC6.1□□□□□ -1.43
SMARCA1P28370 OR9K1P-201ENST00000326513 941 ntBASIC6.1□□□□□ -1.43
SMARCA1P28370 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SMARCA1P28370 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC6.1□□□□□ -1.43
SMARCA1P28370 SNORA17.1-201ENST00000362945 126 ntBASIC6.1□□□□□ -1.43
SMARCA1P28370 RNU1-74P-201ENST00000384108 171 ntBASIC6.1□□□□□ -1.43
SMARCA1P28370 OR8V1P-201ENST00000395193 873 ntBASIC6.1□□□□□ -1.43
SMARCA1P28370 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SMARCA1P28370 MIR1182-201ENST00000408363 97 ntBASIC6.1□□□□□ -1.43
SMARCA1P28370 MIR1178-201ENST00000408396 91 ntBASIC6.1□□□□□ -1.43
SMARCA1P28370 AL590806.1-201ENST00000415818 853 ntBASIC6.1□□□□□ -1.43
SMARCA1P28370 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC6.1□□□□□ -1.43
SMARCA1P28370 SLC4A1APP1-201ENST00000419995 602 ntBASIC6.1□□□□□ -1.43
SMARCA1P28370 AL354766.1-201ENST00000423396 542 ntBASIC6.1□□□□□ -1.43
SMARCA1P28370 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.1□□□□□ -1.43
SMARCA1P28370 NANOGP5-201ENST00000424456 877 ntBASIC6.1□□□□□ -1.43
SMARCA1P28370 AC092634.2-201ENST00000428146 1010 ntBASIC6.1□□□□□ -1.43
SMARCA1P28370 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.1□□□□□ -1.43
SMARCA1P28370 MTND2P40-201ENST00000436718 841 ntBASIC6.1□□□□□ -1.43
SMARCA1P28370 NDUFAF4P2-201ENST00000445374 520 ntBASIC6.1□□□□□ -1.43
SMARCA1P28370 NOP56P2-201ENST00000447491 769 ntBASIC6.1□□□□□ -1.43
SMARCA1P28370 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC6.1□□□□□ -1.43
SMARCA1P28370 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC6.1□□□□□ -1.43
SMARCA1P28370 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SMARCA1P28370 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SMARCA1P28370 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC6.1□□□□□ -1.43
SMARCA1P28370 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC6.1□□□□□ -1.43
SMARCA1P28370 MTHFD2P4-201ENST00000515074 1025 ntBASIC6.1□□□□□ -1.43
SMARCA1P28370 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC6.1□□□□□ -1.43
SMARCA1P28370 AC012400.1-201ENST00000518452 381 ntBASIC6.1□□□□□ -1.43
SMARCA1P28370 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC6.1□□□□□ -1.43
SMARCA1P28370 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC6.1□□□□□ -1.43
SMARCA1P28370 MAL2-205ENST00000521048 575 ntTSL 4 BASIC6.1□□□□□ -1.43
SMARCA1P28370 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC6.1□□□□□ -1.43
SMARCA1P28370 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC6.1□□□□□ -1.43
SMARCA1P28370 CYB5AP5-201ENST00000549779 389 ntBASIC6.1□□□□□ -1.43
SMARCA1P28370 AC127381.1-201ENST00000555979 939 ntBASIC6.1□□□□□ -1.43
SMARCA1P28370 MTCYBP23-201ENST00000558717 1102 ntBASIC6.1□□□□□ -1.43
SMARCA1P28370 AC019322.1-201ENST00000571869 389 ntBASIC6.1□□□□□ -1.43
SMARCA1P28370 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
SMARCA1P28370 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC6.1□□□□□ -1.43
SMARCA1P28370 Z99289.3-201ENST00000605586 594 ntBASIC6.1□□□□□ -1.43
SMARCA1P28370 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC6.1□□□□□ -1.43
SMARCA1P28370 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC6.1□□□□□ -1.43
SMARCA1P28370 AC079395.3-201ENST00000615161 484 ntBASIC6.1□□□□□ -1.43
SMARCA1P28370 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.1□□□□□ -1.43
SMARCA1P28370 AC068057.2-201ENST00000624047 895 ntBASIC6.1□□□□□ -1.43
SMARCA1P28370 AP000676.4-201ENST00000624659 623 ntBASIC6.1□□□□□ -1.43
SMARCA1P28370 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC6.1□□□□□ -1.43
SMARCA1P28370 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC6.1□□□□□ -1.43
SMARCA1P28370 AC135068.12-201ENST00000637370 931 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms