Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.03□□□□□ -1.6
CDH3P22223 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDH3P22223 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDH3P22223 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDH3P22223 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.03□□□□□ -1.6
CDH3P22223 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.03□□□□□ -1.6
CDH3P22223 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CDH3P22223 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.02□□□□□ -1.61
CDH3P22223 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CDH3P22223 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CDH3P22223 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CDH3P22223 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
CDH3P22223 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.02□□□□□ -1.61
CDH3P22223 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CDH3P22223 HSPA8P18-201ENST00000439846 1928 ntBASIC5.02□□□□□ -1.61
CDH3P22223 OR9G4-201ENST00000302957 984 ntBASIC5.02□□□□□ -1.61
CDH3P22223 RNA5SP305-201ENST00000362665 119 ntBASIC5.02□□□□□ -1.61
CDH3P22223 RNA5SP90-201ENST00000364801 99 ntBASIC5.02□□□□□ -1.61
CDH3P22223 RNU6-40P-201ENST00000384254 107 ntBASIC5.02□□□□□ -1.61
CDH3P22223 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.02□□□□□ -1.61
CDH3P22223 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.02□□□□□ -1.61
CDH3P22223 EIF4A1P3-201ENST00000411521 244 ntBASIC5.02□□□□□ -1.61
CDH3P22223 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CDH3P22223 AC016769.2-201ENST00000414815 475 ntBASIC5.02□□□□□ -1.61
CDH3P22223 AC007394.1-201ENST00000421941 531 ntBASIC5.02□□□□□ -1.61
CDH3P22223 OR2AH1P-201ENST00000425717 928 ntBASIC5.02□□□□□ -1.61
CDH3P22223 RPL17P35-201ENST00000432217 549 ntBASIC5.02□□□□□ -1.61
CDH3P22223 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.02□□□□□ -1.61
CDH3P22223 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.02□□□□□ -1.61
CDH3P22223 CCRL1P1-201ENST00000449542 1053 ntBASIC5.02□□□□□ -1.61
CDH3P22223 AL353718.1-201ENST00000451028 517 ntBASIC5.02□□□□□ -1.61
CDH3P22223 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.02□□□□□ -1.61
CDH3P22223 AC243772.1-201ENST00000451620 410 ntBASIC5.02□□□□□ -1.61
CDH3P22223 RPS6P2-201ENST00000454208 705 ntBASIC5.02□□□□□ -1.61
CDH3P22223 CYCSP53-201ENST00000455540 265 ntBASIC5.02□□□□□ -1.61
CDH3P22223 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.02□□□□□ -1.61
CDH3P22223 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.02□□□□□ -1.61
CDH3P22223 EIF2S2P4-201ENST00000461070 984 ntBASIC5.02□□□□□ -1.61
CDH3P22223 RN7SL329P-201ENST00000467740 299 ntBASIC5.02□□□□□ -1.61
CDH3P22223 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.02□□□□□ -1.61
CDH3P22223 CBX1P5-201ENST00000475330 559 ntBASIC5.02□□□□□ -1.61
CDH3P22223 RPL7P41-201ENST00000485823 957 ntBASIC5.02□□□□□ -1.61
CDH3P22223 UBA52P3-201ENST00000491303 382 ntBASIC5.02□□□□□ -1.61
CDH3P22223 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.02□□□□□ -1.61
CDH3P22223 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC5.02□□□□□ -1.61
CDH3P22223 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.02□□□□□ -1.61
CDH3P22223 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.02□□□□□ -1.61
CDH3P22223 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.02□□□□□ -1.61
CDH3P22223 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.02□□□□□ -1.61
CDH3P22223 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CDH3P22223 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.02□□□□□ -1.61
CDH3P22223 TMF1P1-201ENST00000576058 373 ntBASIC5.02□□□□□ -1.61
CDH3P22223 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CDH3P22223 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.02□□□□□ -1.61
CDH3P22223 AC133552.5-201ENST00000604266 540 ntBASIC5.02□□□□□ -1.61
CDH3P22223 AL162431.4-201ENST00000604674 411 ntBASIC5.02□□□□□ -1.61
CDH3P22223 AC007423.1-201ENST00000605009 627 ntBASIC5.02□□□□□ -1.61
CDH3P22223 AL355802.4-201ENST00000607635 548 ntBASIC5.02□□□□□ -1.61
CDH3P22223 AL133445.2-201ENST00000611191 527 ntBASIC5.02□□□□□ -1.61
CDH3P22223 AC068870.2-201ENST00000620635 389 ntBASIC5.02□□□□□ -1.61
CDH3P22223 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.02□□□□□ -1.61
CDH3P22223 AP002799.1-201ENST00000623552 423 ntBASIC5.02□□□□□ -1.61
CDH3P22223 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.02□□□□□ -1.61
CDH3P22223 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CDH3P22223 AL356317.1-201ENST00000396110 1436 ntBASIC5.02□□□□□ -1.61
CDH3P22223 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.02□□□□□ -1.61
CDH3P22223 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CDH3P22223 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CDH3P22223 Z95327.2-201ENST00000414579 1873 ntBASIC5.02□□□□□ -1.61
CDH3P22223 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CDH3P22223 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
CDH3P22223 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CDH3P22223 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
CDH3P22223 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CDH3P22223 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CDH3P22223 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CDH3P22223 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CDH3P22223 RNA5SP223-201ENST00000365174 120 ntBASIC5.01□□□□□ -1.61
CDH3P22223 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.01□□□□□ -1.61
CDH3P22223 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.01□□□□□ -1.61
CDH3P22223 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CDH3P22223 SNORA11B-201ENST00000408175 129 ntBASIC5.01□□□□□ -1.61
CDH3P22223 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.01□□□□□ -1.61
CDH3P22223 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.01□□□□□ -1.61
CDH3P22223 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.01□□□□□ -1.61
CDH3P22223 AC092570.3-201ENST00000420113 693 ntBASIC5.01□□□□□ -1.61
CDH3P22223 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.01□□□□□ -1.61
CDH3P22223 AL358176.3-201ENST00000420757 454 ntBASIC5.01□□□□□ -1.61
CDH3P22223 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC5.01□□□□□ -1.61
CDH3P22223 AC104333.2-201ENST00000422630 192 ntBASIC5.01□□□□□ -1.61
CDH3P22223 RPS4XP16-201ENST00000427198 791 ntBASIC5.01□□□□□ -1.61
CDH3P22223 HSPD1P12-201ENST00000429127 1069 ntBASIC5.01□□□□□ -1.61
CDH3P22223 AP000949.1-201ENST00000438328 629 ntBASIC5.01□□□□□ -1.61
CDH3P22223 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.01□□□□□ -1.61
CDH3P22223 AC092647.3-201ENST00000443044 633 ntBASIC5.01□□□□□ -1.61
CDH3P22223 AP002345.1-201ENST00000456493 928 ntBASIC5.01□□□□□ -1.61
CDH3P22223 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.01□□□□□ -1.61
CDH3P22223 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.01□□□□□ -1.61
CDH3P22223 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.01□□□□□ -1.61
CDH3P22223 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms