Protein–RNA interactions for Protein: P20585

MSH3, DNA mismatch repair protein Msh3, humanhuman

Predictions only

Length 1,137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3P20585 AC016180.1-201ENST00000567945 403 ntBASIC5.01□□□□□ -1.61
MSH3P20585 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.01□□□□□ -1.61
MSH3P20585 AC011840.5-201ENST00000582125 771 ntBASIC5.01□□□□□ -1.61
MSH3P20585 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.01□□□□□ -1.61
MSH3P20585 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.01□□□□□ -1.61
MSH3P20585 AC005776.1-201ENST00000603164 290 ntBASIC5.01□□□□□ -1.61
MSH3P20585 AL139022.2-201ENST00000606934 443 ntBASIC5.01□□□□□ -1.61
MSH3P20585 EIF3FP1-201ENST00000613970 806 ntBASIC5.01□□□□□ -1.61
MSH3P20585 AP002799.1-201ENST00000623552 423 ntBASIC5.01□□□□□ -1.61
MSH3P20585 AC079298.2-201ENST00000623885 459 ntBASIC5.01□□□□□ -1.61
MSH3P20585 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC5.01□□□□□ -1.61
MSH3P20585 AC073869.10-201ENST00000642016 354 ntBASIC5.01□□□□□ -1.61
MSH3P20585 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.01□□□□□ -1.61
MSH3P20585 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
MSH3P20585 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
MSH3P20585 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
MSH3P20585 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
MSH3P20585 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
MSH3P20585 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
MSH3P20585 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
MSH3P20585 AC110792.3-201ENST00000595906 1614 ntBASIC5.01□□□□□ -1.61
MSH3P20585 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
MSH3P20585 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
MSH3P20585 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
MSH3P20585 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5□□□□□ -1.61
MSH3P20585 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
MSH3P20585 CASC19-281ENST00000642118 1554 ntBASIC5□□□□□ -1.61
MSH3P20585 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
MSH3P20585 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5□□□□□ -1.61
MSH3P20585 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5□□□□□ -1.61
MSH3P20585 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
MSH3P20585 RNA5SP305-201ENST00000362665 119 ntBASIC5□□□□□ -1.61
MSH3P20585 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5□□□□□ -1.61
MSH3P20585 SNORA70-201ENST00000384436 135 ntBASIC5□□□□□ -1.61
MSH3P20585 Z97832.1-201ENST00000402490 328 ntBASIC5□□□□□ -1.61
MSH3P20585 SETP15-201ENST00000412724 337 ntBASIC5□□□□□ -1.61
MSH3P20585 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5□□□□□ -1.61
MSH3P20585 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5□□□□□ -1.61
MSH3P20585 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5□□□□□ -1.61
MSH3P20585 BX323845.1-201ENST00000432417 179 ntBASIC5□□□□□ -1.61
MSH3P20585 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5□□□□□ -1.61
MSH3P20585 MTND6P32-201ENST00000457611 483 ntBASIC5□□□□□ -1.61
MSH3P20585 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5□□□□□ -1.61
MSH3P20585 BX284632.1-201ENST00000478218 541 ntBASIC5□□□□□ -1.61
MSH3P20585 AC005412.2-201ENST00000492004 341 ntBASIC5□□□□□ -1.61
MSH3P20585 RN7SL441P-201ENST00000492388 296 ntBASIC5□□□□□ -1.61
MSH3P20585 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5□□□□□ -1.61
MSH3P20585 AC073073.1-201ENST00000493920 463 ntBASIC5□□□□□ -1.61
MSH3P20585 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5□□□□□ -1.61
MSH3P20585 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC5□□□□□ -1.61
MSH3P20585 AK4P6-201ENST00000505168 528 ntBASIC5□□□□□ -1.61
MSH3P20585 COX6B1P5-201ENST00000509843 249 ntBASIC5□□□□□ -1.61
MSH3P20585 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC5□□□□□ -1.61
MSH3P20585 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5□□□□□ -1.61
MSH3P20585 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5□□□□□ -1.61
MSH3P20585 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5□□□□□ -1.61
MSH3P20585 BNIP3P27-201ENST00000599991 412 ntBASIC5□□□□□ -1.61
MSH3P20585 AC087763.1-201ENST00000603391 286 ntBASIC5□□□□□ -1.61
MSH3P20585 AC105254.2-201ENST00000603636 436 ntBASIC5□□□□□ -1.61
MSH3P20585 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5□□□□□ -1.61
MSH3P20585 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC5□□□□□ -1.61
MSH3P20585 AC211433.2-201ENST00000608433 387 ntBASIC5□□□□□ -1.61
MSH3P20585 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5□□□□□ -1.61
MSH3P20585 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5□□□□□ -1.61
MSH3P20585 AC093799.2-201ENST00000610062 578 ntBASIC5□□□□□ -1.61
MSH3P20585 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5□□□□□ -1.61
MSH3P20585 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5□□□□□ -1.61
MSH3P20585 AL445493.3-201ENST00000619568 477 ntBASIC5□□□□□ -1.61
MSH3P20585 AC074140.1-201ENST00000621617 208 ntBASIC5□□□□□ -1.61
MSH3P20585 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5□□□□□ -1.61
MSH3P20585 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5□□□□□ -1.61
MSH3P20585 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5□□□□□ -1.61
MSH3P20585 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
MSH3P20585 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5□□□□□ -1.61
MSH3P20585 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
MSH3P20585 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
MSH3P20585 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5□□□□□ -1.61
MSH3P20585 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.99□□□□□ -1.61
MSH3P20585 AC025574.1-201ENST00000554784 1653 ntBASIC4.99□□□□□ -1.61
MSH3P20585 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
MSH3P20585 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.99□□□□□ -1.61
MSH3P20585 AL731532.2-201ENST00000623542 1953 ntBASIC4.99□□□□□ -1.61
MSH3P20585 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
MSH3P20585 RNU4-4P-201ENST00000364588 130 ntBASIC4.99□□□□□ -1.61
MSH3P20585 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.99□□□□□ -1.61
MSH3P20585 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
MSH3P20585 RPL10P10-201ENST00000403509 664 ntBASIC4.99□□□□□ -1.61
MSH3P20585 RN7SKP16-201ENST00000410180 299 ntBASIC4.99□□□□□ -1.61
MSH3P20585 GJA6P-201ENST00000415117 1042 ntBASIC4.99□□□□□ -1.61
MSH3P20585 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.99□□□□□ -1.61
MSH3P20585 MTND4P24-201ENST00000424002 397 ntBASIC4.99□□□□□ -1.61
MSH3P20585 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.99□□□□□ -1.61
MSH3P20585 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.99□□□□□ -1.61
MSH3P20585 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.99□□□□□ -1.61
MSH3P20585 ARAFP2-201ENST00000440565 559 ntBASIC4.99□□□□□ -1.61
MSH3P20585 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.99□□□□□ -1.61
MSH3P20585 AL591623.2-201ENST00000449978 222 ntBASIC4.99□□□□□ -1.61
MSH3P20585 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC4.99□□□□□ -1.61
MSH3P20585 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.99□□□□□ -1.61
MSH3P20585 RPL7AP6-201ENST00000477943 801 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms