Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
FREM3P0C091 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.2□□□□□ -1.74
FREM3P0C091 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
FREM3P0C091 MTCO1P15-201ENST00000529569 1526 ntBASIC4.2□□□□□ -1.74
FREM3P0C091 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
FREM3P0C091 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.2□□□□□ -1.74
FREM3P0C091 AL138820.1-201ENST00000617901 5305 ntBASIC4.2□□□□□ -1.74
FREM3P0C091 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC4.2□□□□□ -1.74
FREM3P0C091 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
FREM3P0C091 RNU1-130P-201ENST00000363930 160 ntBASIC4.19□□□□□ -1.74
FREM3P0C091 CHIAP3-201ENST00000423668 1133 ntBASIC4.19□□□□□ -1.74
FREM3P0C091 CNOT7P1-201ENST00000429006 852 ntBASIC4.19□□□□□ -1.74
FREM3P0C091 TDGF1P1-201ENST00000445734 527 ntBASIC4.19□□□□□ -1.74
FREM3P0C091 AC108751.2-201ENST00000469993 231 ntBASIC4.19□□□□□ -1.74
FREM3P0C091 STRADBP1-201ENST00000478954 1281 ntBASIC4.19□□□□□ -1.74
FREM3P0C091 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.19□□□□□ -1.74
FREM3P0C091 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.19□□□□□ -1.74
FREM3P0C091 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.19□□□□□ -1.74
FREM3P0C091 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.19□□□□□ -1.74
FREM3P0C091 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
FREM3P0C091 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
FREM3P0C091 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.19□□□□□ -1.74
FREM3P0C091 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.19□□□□□ -1.74
FREM3P0C091 AL121873.1-201ENST00000616013 524 ntBASIC4.19□□□□□ -1.74
FREM3P0C091 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
FREM3P0C091 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
FREM3P0C091 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
FREM3P0C091 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
FREM3P0C091 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
FREM3P0C091 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
FREM3P0C091 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
FREM3P0C091 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
FREM3P0C091 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
FREM3P0C091 MIR659-201ENST00000384963 97 ntBASIC4.19□□□□□ -1.74
FREM3P0C091 AC092570.3-201ENST00000420113 693 ntBASIC4.19□□□□□ -1.74
FREM3P0C091 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.19□□□□□ -1.74
FREM3P0C091 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.19□□□□□ -1.74
FREM3P0C091 RPL23AP93-201ENST00000440847 484 ntBASIC4.19□□□□□ -1.74
FREM3P0C091 RPL23AP43-201ENST00000446445 471 ntBASIC4.19□□□□□ -1.74
FREM3P0C091 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
FREM3P0C091 CEACAMP6-201ENST00000452007 574 ntBASIC4.19□□□□□ -1.74
FREM3P0C091 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
FREM3P0C091 RPL21P126-201ENST00000470049 478 ntBASIC4.19□□□□□ -1.74
FREM3P0C091 AC091868.1-201ENST00000508746 304 ntBASIC4.19□□□□□ -1.74
FREM3P0C091 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.19□□□□□ -1.74
FREM3P0C091 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.19□□□□□ -1.74
FREM3P0C091 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.19□□□□□ -1.74
FREM3P0C091 OR8A2P-201ENST00000528631 952 ntBASIC4.19□□□□□ -1.74
FREM3P0C091 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.19□□□□□ -1.74
FREM3P0C091 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.19□□□□□ -1.74
FREM3P0C091 AC069061.3-201ENST00000582254 823 ntBASIC4.19□□□□□ -1.74
FREM3P0C091 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.19□□□□□ -1.74
FREM3P0C091 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
FREM3P0C091 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
FREM3P0C091 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.19□□□□□ -1.74
FREM3P0C091 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
FREM3P0C091 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
FREM3P0C091 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
FREM3P0C091 AL592291.1-201ENST00000403830 352 ntBASIC4.18□□□□□ -1.74
FREM3P0C091 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.18□□□□□ -1.74
FREM3P0C091 AC245028.1-201ENST00000423259 256 ntBASIC4.18□□□□□ -1.74
FREM3P0C091 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.18□□□□□ -1.74
FREM3P0C091 NFYAP1-201ENST00000431953 972 ntBASIC4.18□□□□□ -1.74
FREM3P0C091 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.18□□□□□ -1.74
FREM3P0C091 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.18□□□□□ -1.74
FREM3P0C091 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.18□□□□□ -1.74
FREM3P0C091 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.18□□□□□ -1.74
FREM3P0C091 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.18□□□□□ -1.74
FREM3P0C091 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.18□□□□□ -1.74
FREM3P0C091 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.18□□□□□ -1.74
FREM3P0C091 AC130352.1-201ENST00000602979 661 ntBASIC4.18□□□□□ -1.74
FREM3P0C091 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
FREM3P0C091 MIR8069-1-201ENST00000616627 86 ntBASIC4.18□□□□□ -1.74
FREM3P0C091 MIR8069-2-201ENST00000621412 86 ntBASIC4.18□□□□□ -1.74
FREM3P0C091 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.18□□□□□ -1.74
FREM3P0C091 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.18□□□□□ -1.74
FREM3P0C091 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.18□□□□□ -1.74
FREM3P0C091 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
FREM3P0C091 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
FREM3P0C091 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
FREM3P0C091 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.18□□□□□ -1.74
FREM3P0C091 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
FREM3P0C091 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
FREM3P0C091 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.18□□□□□ -1.74
FREM3P0C091 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
FREM3P0C091 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
FREM3P0C091 AC108467.2-201ENST00000617640 1597 ntBASIC4.18□□□□□ -1.74
FREM3P0C091 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
FREM3P0C091 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.18□□□□□ -1.74
FREM3P0C091 NRBF2P2-201ENST00000413087 861 ntBASIC4.18□□□□□ -1.74
FREM3P0C091 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.18□□□□□ -1.74
FREM3P0C091 AL121878.1-201ENST00000418638 859 ntBASIC4.18□□□□□ -1.74
FREM3P0C091 RPL23AP1-201ENST00000428990 471 ntBASIC4.18□□□□□ -1.74
FREM3P0C091 TPT1P13-201ENST00000449760 499 ntBASIC4.18□□□□□ -1.74
FREM3P0C091 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.18□□□□□ -1.74
FREM3P0C091 AC006463.2-201ENST00000473326 348 ntBASIC4.18□□□□□ -1.74
FREM3P0C091 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.18□□□□□ -1.74
FREM3P0C091 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.18□□□□□ -1.74
FREM3P0C091 AP006289.1-201ENST00000538089 277 ntBASIC4.18□□□□□ -1.74
FREM3P0C091 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms