Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.05□□□□□ -1.6
LDLRP01130 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.05□□□□□ -1.6
LDLRP01130 MTND1P8-201ENST00000571424 950 ntBASIC5.05□□□□□ -1.6
LDLRP01130 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.05□□□□□ -1.6
LDLRP01130 MIR4760-201ENST00000585040 80 ntBASIC5.05□□□□□ -1.6
LDLRP01130 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.05□□□□□ -1.6
LDLRP01130 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.05□□□□□ -1.6
LDLRP01130 AC009948.4-201ENST00000604692 675 ntBASIC5.05□□□□□ -1.6
LDLRP01130 AC135178.6-201ENST00000605314 398 ntBASIC5.05□□□□□ -1.6
LDLRP01130 AC025574.2-201ENST00000615621 514 ntBASIC5.05□□□□□ -1.6
LDLRP01130 AL445528.2-201ENST00000620582 470 ntBASIC5.05□□□□□ -1.6
LDLRP01130 AP002799.1-201ENST00000623552 423 ntBASIC5.05□□□□□ -1.6
LDLRP01130 AP002505.2-201ENST00000623585 696 ntBASIC5.05□□□□□ -1.6
LDLRP01130 AP000648.2-201ENST00000624182 404 ntBASIC5.05□□□□□ -1.6
LDLRP01130 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC5.05□□□□□ -1.6
LDLRP01130 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.05□□□□□ -1.6
LDLRP01130 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LDLRP01130 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.05□□□□□ -1.6
LDLRP01130 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
LDLRP01130 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LDLRP01130 RLIMP2-201ENST00000427891 1563 ntBASIC5.04□□□□□ -1.6
LDLRP01130 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LDLRP01130 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.04□□□□□ -1.6
LDLRP01130 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LDLRP01130 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.04□□□□□ -1.6
LDLRP01130 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LDLRP01130 HSPA8P18-201ENST00000439846 1928 ntBASIC5.04□□□□□ -1.6
LDLRP01130 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
LDLRP01130 RNU6-650P-201ENST00000365658 111 ntBASIC5.04□□□□□ -1.6
LDLRP01130 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LDLRP01130 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.04□□□□□ -1.6
LDLRP01130 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC5.04□□□□□ -1.6
LDLRP01130 PTP4A1P3-201ENST00000433661 420 ntBASIC5.04□□□□□ -1.6
LDLRP01130 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.04□□□□□ -1.6
LDLRP01130 CEACAMP9-201ENST00000442990 513 ntBASIC5.04□□□□□ -1.6
LDLRP01130 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.04□□□□□ -1.6
LDLRP01130 AL672167.3-201ENST00000465951 960 ntBASIC5.04□□□□□ -1.6
LDLRP01130 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.04□□□□□ -1.6
LDLRP01130 RPL5P22-201ENST00000480199 884 ntBASIC5.04□□□□□ -1.6
LDLRP01130 LARP7P4-201ENST00000481075 878 ntBASIC5.04□□□□□ -1.6
LDLRP01130 AC109462.1-201ENST00000491087 368 ntBASIC5.04□□□□□ -1.6
LDLRP01130 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.04□□□□□ -1.6
LDLRP01130 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LDLRP01130 AC109464.1-201ENST00000511091 819 ntBASIC5.04□□□□□ -1.6
LDLRP01130 AC103833.1-201ENST00000517442 172 ntBASIC5.04□□□□□ -1.6
LDLRP01130 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC5.04□□□□□ -1.6
LDLRP01130 VTA1P2-201ENST00000520205 911 ntBASIC5.04□□□□□ -1.6
LDLRP01130 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC5.04□□□□□ -1.6
LDLRP01130 OSBPL9P3-201ENST00000534523 595 ntBASIC5.04□□□□□ -1.6
LDLRP01130 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.04□□□□□ -1.6
LDLRP01130 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.04□□□□□ -1.6
LDLRP01130 AC122134.1-201ENST00000565664 1104 ntBASIC5.04□□□□□ -1.6
LDLRP01130 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.04□□□□□ -1.6
LDLRP01130 FAM106CP-201ENST00000582212 507 ntBASIC5.04□□□□□ -1.6
LDLRP01130 MIR4480-201ENST00000582492 71 ntBASIC5.04□□□□□ -1.6
LDLRP01130 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.04□□□□□ -1.6
LDLRP01130 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.04□□□□□ -1.6
LDLRP01130 MTCO3P22-201ENST00000603219 784 ntBASIC5.04□□□□□ -1.6
LDLRP01130 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.04□□□□□ -1.6
LDLRP01130 AC108359.1-201ENST00000616451 1211 ntBASIC5.04□□□□□ -1.6
LDLRP01130 AC109583.2-201ENST00000617367 129 ntBASIC5.04□□□□□ -1.6
LDLRP01130 AC109809.1-201ENST00000619665 545 ntBASIC5.04□□□□□ -1.6
LDLRP01130 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.04□□□□□ -1.6
LDLRP01130 AC010435.1-201ENST00000623353 1177 ntBASIC5.04□□□□□ -1.6
LDLRP01130 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.04□□□□□ -1.6
LDLRP01130 AC006927.4-201ENST00000639187 543 ntBASIC5.04□□□□□ -1.6
LDLRP01130 AC073869.10-201ENST00000642016 354 ntBASIC5.04□□□□□ -1.6
LDLRP01130 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.04□□□□□ -1.6
LDLRP01130 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.04□□□□□ -1.6
LDLRP01130 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
LDLRP01130 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
LDLRP01130 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.04□□□□□ -1.6
LDLRP01130 STX3-208ENST00000641815 3236 ntBASIC5.04□□□□□ -1.6
LDLRP01130 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LDLRP01130 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.04□□□□□ -1.6
LDLRP01130 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LDLRP01130 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LDLRP01130 AC107021.2-201ENST00000567714 2095 ntBASIC5.03□□□□□ -1.6
LDLRP01130 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.03□□□□□ -1.6
LDLRP01130 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.03□□□□□ -1.6
LDLRP01130 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
LDLRP01130 RN7SKP74-201ENST00000362849 309 ntBASIC5.03□□□□□ -1.6
LDLRP01130 RN7SKP153-201ENST00000365026 316 ntBASIC5.03□□□□□ -1.6
LDLRP01130 RNU6-1263P-201ENST00000384601 106 ntBASIC5.03□□□□□ -1.6
LDLRP01130 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
LDLRP01130 AC016397.1-201ENST00000412463 242 ntBASIC5.03□□□□□ -1.6
LDLRP01130 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
LDLRP01130 RPL26P29-201ENST00000415623 438 ntBASIC5.03□□□□□ -1.6
LDLRP01130 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.03□□□□□ -1.6
LDLRP01130 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC5.03□□□□□ -1.6
LDLRP01130 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC5.03□□□□□ -1.6
LDLRP01130 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LDLRP01130 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.03□□□□□ -1.6
LDLRP01130 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC5.03□□□□□ -1.6
LDLRP01130 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.03□□□□□ -1.6
LDLRP01130 MTATP6P17-201ENST00000431030 672 ntBASIC5.03□□□□□ -1.6
LDLRP01130 SCAND3P1-201ENST00000439854 1060 ntBASIC5.03□□□□□ -1.6
LDLRP01130 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.03□□□□□ -1.6
LDLRP01130 AL591623.2-201ENST00000449978 222 ntBASIC5.03□□□□□ -1.6
LDLRP01130 DNAJB5P1-201ENST00000454004 806 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms