Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 HMGN1P36-201ENST00000446623 298 ntBASIC4.76□□□□□ -1.65
SHOX2O60902 Z92846.1-201ENST00000456203 268 ntBASIC4.76□□□□□ -1.65
SHOX2O60902 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.76□□□□□ -1.65
SHOX2O60902 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.76□□□□□ -1.65
SHOX2O60902 AC100832.1-201ENST00000471945 383 ntBASIC4.76□□□□□ -1.65
SHOX2O60902 UBTFL6-201ENST00000477929 1024 ntBASIC4.76□□□□□ -1.65
SHOX2O60902 GTF2F2P1-201ENST00000511083 675 ntBASIC4.76□□□□□ -1.65
SHOX2O60902 ATP5LP3-201ENST00000514223 304 ntBASIC4.76□□□□□ -1.65
SHOX2O60902 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.76□□□□□ -1.65
SHOX2O60902 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.76□□□□□ -1.65
SHOX2O60902 AC008126.1-201ENST00000549019 480 ntBASIC4.76□□□□□ -1.65
SHOX2O60902 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.76□□□□□ -1.65
SHOX2O60902 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SHOX2O60902 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC4.76□□□□□ -1.65
SHOX2O60902 AC026368.1-201ENST00000614934 690 ntBASIC4.76□□□□□ -1.65
SHOX2O60902 AC018445.2-201ENST00000622987 260 ntBASIC4.76□□□□□ -1.65
SHOX2O60902 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SHOX2O60902 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.76□□□□□ -1.65
SHOX2O60902 AC097504.1-201ENST00000515103 2415 ntBASIC4.76□□□□□ -1.65
SHOX2O60902 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SHOX2O60902 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.76□□□□□ -1.65
SHOX2O60902 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
SHOX2O60902 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.76□□□□□ -1.65
SHOX2O60902 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.75□□□□□ -1.65
SHOX2O60902 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SHOX2O60902 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SHOX2O60902 AC012020.1-201ENST00000624541 1728 ntBASIC4.75□□□□□ -1.65
SHOX2O60902 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.75□□□□□ -1.65
SHOX2O60902 AC011266.1-201ENST00000624119 3569 ntBASIC4.75□□□□□ -1.65
SHOX2O60902 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
SHOX2O60902 TMSB4XP4-201ENST00000323496 618 ntBASIC4.75□□□□□ -1.65
SHOX2O60902 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SHOX2O60902 RN7SKP124-201ENST00000364730 341 ntBASIC4.75□□□□□ -1.65
SHOX2O60902 AC007068.1-201ENST00000396690 844 ntBASIC4.75□□□□□ -1.65
SHOX2O60902 AL136116.2-201ENST00000404020 785 ntBASIC4.75□□□□□ -1.65
SHOX2O60902 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.75□□□□□ -1.65
SHOX2O60902 RN7SKP114-201ENST00000410327 279 ntBASIC4.75□□□□□ -1.65
SHOX2O60902 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.75□□□□□ -1.65
SHOX2O60902 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.75□□□□□ -1.65
SHOX2O60902 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.75□□□□□ -1.65
SHOX2O60902 AC108075.1-201ENST00000424692 529 ntBASIC4.75□□□□□ -1.65
SHOX2O60902 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.75□□□□□ -1.65
SHOX2O60902 YWHAEP5-201ENST00000431545 765 ntBASIC4.75□□□□□ -1.65
SHOX2O60902 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.75□□□□□ -1.65
SHOX2O60902 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.75□□□□□ -1.65
SHOX2O60902 GSTA7P-201ENST00000438425 448 ntBASIC4.75□□□□□ -1.65
SHOX2O60902 AP000281.1-201ENST00000444036 316 ntBASIC4.75□□□□□ -1.65
SHOX2O60902 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.75□□□□□ -1.65
SHOX2O60902 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SHOX2O60902 MTND6P5-201ENST00000448266 512 ntBASIC4.75□□□□□ -1.65
SHOX2O60902 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.75□□□□□ -1.65
SHOX2O60902 AC104849.1-201ENST00000462623 405 ntBASIC4.75□□□□□ -1.65
SHOX2O60902 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.75□□□□□ -1.65
SHOX2O60902 VWA8P1-201ENST00000510889 176 ntBASIC4.75□□□□□ -1.65
SHOX2O60902 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SHOX2O60902 OR5M7P-201ENST00000526140 972 ntBASIC4.75□□□□□ -1.65
SHOX2O60902 AC134349.2-201ENST00000535136 910 ntBASIC4.75□□□□□ -1.65
SHOX2O60902 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.75□□□□□ -1.65
SHOX2O60902 AC243960.7-201ENST00000623532 707 ntBASIC4.75□□□□□ -1.65
SHOX2O60902 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.75□□□□□ -1.65
SHOX2O60902 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SHOX2O60902 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SHOX2O60902 MTCO1P15-201ENST00000529569 1526 ntBASIC4.75□□□□□ -1.65
SHOX2O60902 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
SHOX2O60902 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.75□□□□□ -1.65
SHOX2O60902 CASC19-255ENST00000641733 1385 ntBASIC4.75□□□□□ -1.65
SHOX2O60902 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
SHOX2O60902 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SHOX2O60902 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.75□□□□□ -1.65
SHOX2O60902 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SHOX2O60902 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
SHOX2O60902 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SHOX2O60902 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SHOX2O60902 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHOX2O60902 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHOX2O60902 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHOX2O60902 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
SHOX2O60902 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHOX2O60902 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHOX2O60902 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.74□□□□□ -1.65
SHOX2O60902 AL390774.1-201ENST00000411924 246 ntBASIC4.74□□□□□ -1.65
SHOX2O60902 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.74□□□□□ -1.65
SHOX2O60902 MTND2P11-201ENST00000423638 648 ntBASIC4.74□□□□□ -1.65
SHOX2O60902 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.74□□□□□ -1.65
SHOX2O60902 AC079804.1-201ENST00000461922 436 ntBASIC4.74□□□□□ -1.65
SHOX2O60902 CCDC75P1-201ENST00000469247 791 ntBASIC4.74□□□□□ -1.65
SHOX2O60902 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.74□□□□□ -1.65
SHOX2O60902 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.74□□□□□ -1.65
SHOX2O60902 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.74□□□□□ -1.65
SHOX2O60902 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.74□□□□□ -1.65
SHOX2O60902 RN7SL717P-201ENST00000478343 297 ntBASIC4.74□□□□□ -1.65
SHOX2O60902 RN7SL547P-201ENST00000490793 290 ntBASIC4.74□□□□□ -1.65
SHOX2O60902 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.74□□□□□ -1.65
SHOX2O60902 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.74□□□□□ -1.65
SHOX2O60902 IGHV3-63-201ENST00000518422 341 ntBASIC4.74□□□□□ -1.65
SHOX2O60902 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.74□□□□□ -1.65
SHOX2O60902 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.74□□□□□ -1.65
SHOX2O60902 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.74□□□□□ -1.65
SHOX2O60902 AC093249.4-201ENST00000564755 259 ntBASIC4.74□□□□□ -1.65
SHOX2O60902 AC020978.7-201ENST00000575953 1187 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms